Gene Pcal_1351 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcal_1351 
Symbol 
ID4908791 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum calidifontis JCM 11548 
KingdomArchaea 
Replicon accessionNC_009073 
Strand- 
Start bp1267171 
End bp1267728 
Gene Length558 bp 
Protein Length185 aa 
Translation table11 
GC content59% 
IMG OID640125103 
Producthypothetical protein 
Protein accessionYP_001056239 
Protein GI126459961 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.206978 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCAGATTT TTAGGCCCTA CCGAGACTGG GCGAGGTCGG CCAAGGTGTT AGACGACAGG 
AGGCTTGGGA AGCAGAGGGT GGAGACCAAG CAGGTGTTGC TGGCCATTTT GAGGAAGCTC 
GGCGTCTTGG CGGATGGGCG CAGGGGGTGG CTAAACCACC CCGTGGTCTT GATGTACTTC 
AACGGGGGGA GGCCCTACGT GGGAGACCTC GTGGGCTACT TCTACGCCAT TGTGGAAGAG 
TGGAAGGCGA GGGGGCACAA GAACAACATC TCCCTCGCCG ACGTGGTGCC CCTCTTGGCG 
AAGGTAAAGG GGGCGCCGGG CACCCCCATA ACCCACGTCC ACGAGGTAGA GTACAGGCGC 
GTATTGATAC TAAAGGAGCC CTGCCACTAC CTAAGGGTCT TCTCACCCGA GGAGGTGGCC 
GAAGTCCTAG AGACAGAGCC CGCGCCAATA CCCGGGGTCA ACACCTGGAT ACTCCAAGTA 
TACGGCCAAT ACAGGAGGTT TGTGGACAAG TTGAAGAGGG GGGAGGTAGA CTGCGCATCC 
ATATTTCCGA GAAGCTGA
 
Protein sequence
MQIFRPYRDW ARSAKVLDDR RLGKQRVETK QVLLAILRKL GVLADGRRGW LNHPVVLMYF 
NGGRPYVGDL VGYFYAIVEE WKARGHKNNI SLADVVPLLA KVKGAPGTPI THVHEVEYRR 
VLILKEPCHY LRVFSPEEVA EVLETEPAPI PGVNTWILQV YGQYRRFVDK LKRGEVDCAS 
IFPRS