| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcal_1330 |
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| Symbol | |
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| ID | 4909448 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pyrobaculum calidifontis JCM 11548 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009073 |
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| Strand | + |
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| Start bp | 1246213 |
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| End bp | 1248039 |
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| Gene Length | 1827 bp |
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| Protein Length | 608 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640125081 |
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| Product | hypothetical protein |
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| Protein accession | YP_001056218 |
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| Protein GI | 126459940 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4880] Secreted protein containing C-terminal beta-propeller domain distantly related to WD-40 repeats |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.696713 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCTCCCAA CGGAAGGCGA AGGCAGCGTG TACTTTAAGT ACATCACATT TTTAACCCAC
GGCCCCGAGG GAGCCATGTG GAAGCTGGCG GCGGCCGTGT TGGCCTTGGC GCTTCTCTTG
GCCTTGGCCG GCGGCTCGCC GCCTCAGCCC ACCGGCGCGG TAGAGGCGCT GCAGCTCCCA
GTGGTTAACC TCTCGGAGCT ACGCATGGTG ACCGGCTGGT CCGCCGTCCC CACCGCCCTC
TTCTACTACG CGGCCGCCGA CGCCGCGCCC GCCGTTGCGG CAAACGTGCA AGTGGCCGGC
GTGGACGAGG AGGACTACGT GAAATTCGAC GGGGAGAGGC TCTACGTTGC GTATAGGGGC
TACGTCTACG TGGTGGGGCC AGACTTGTCC GTGGAGAAGA GGTTGCCCTG CCCCTCCTCG
CTGGTCTGCT ACGTCTTTGC CTGGGGCAAC TCGGTGCTGG CCTACTCGCC CACTGAGGCG
GGCACAGTGC TCTACCTATA CGGCCCGTGG GGGAGGGCTG TCTACAACTA CTCCGGGTAC
CCCGTGTCCA CGAGGATGCG GGACGGCGTG GTGTACATTG TCGCAATGGG GGGCGTGGAG
GCGGAGATAA ACGGCGCCGC GGTCAAGGAG GCCCCCCTCC TCTCCCTCGG CGATCCCCCC
GCCACGCTCA TAGTGGCGGC TGTGGACATG AGGACAGGCC GCTTCAACGC CGCGGCCTAC
GTCTCCTCCG CGGTCAGCCA CGTCTACATG AGGGGAAACA GGCTGTACAT AGCCGCGCCC
CTGAGCCCCT ACGACCTCGC CTACGAGGCG ACCAAGGCCG TGTGGGAGAG ACTGCCCCCG
GAGATGAGGG CCGTGCTTGA CATGGAAAAC GTCTACACCT TCTACAAGAC CGTCAGAGGG
TTGCTGGAGT GGAGAGGCGG GGAGTACCTG TCCTACCTCA ACAAGGCCAA CACCACCACG
GCCACCAAGA TCTACGTCTT TGAGACAGAG GGCGTGGAGG CAAGGCTCAA GGCCGTCTTT
ATAGTCCCCG GCCGCGTCTT AGACCAATTC GCCGTGGAAG AGCTTGGGGA CAGGCTGGTG
GTGGCCACCA CCGCCGCCCC CGTCAAATTC GAGCTCCTAC GCCCACCCCC AGCCGACCCG
TTCCCCTCGG TGATTAAGAG AGAGGGGTTG CCCACACAAA TTCCGCCGCC CTCCCCACCG
CCCGTGCTCT ACGCCGCTGA GGGGGAGCCC ACAAACGCCG TCTACCTCTA CACGCCGGAT
GGGACATTGG TGGTCAAGGC GGAGGGGCTG GCCAGTGGCG AGAGGATATA CGCCGCGCGC
CTCGTGGGCT CCACTCTCTA CCTAGTCACC TTTAGGCAGG CCGACCCGCT GTTTGCGGTG
GACTTGTCCC GGGGAGAGCC ACGGGTGCTT GGCTACCTCA AGACGCCGGG CTTCTCGGAG
TACCTACACC CCGTGGCCCC CGGCAAGTTG TTGGGCGTCG GCGTCTACGG CGACGGCGTC
AAGATCGCGC TGTTCGACGT CTCCAACCCC GCGGCGCCCC GCGAGGTCTC CAACATCACC
GTGCCCCACT CCTATACACC CATCATATTC GACCACCACG CCTTCGCCTA CAGCCAGGGA
GTGGCCGTGG TGCCCATCCG CCTCCAGTGG CGGCAGTGCG CCGTTCTCGC CGTGGAAGTC
GGCGACGGCC TAACGGCGAG GACCTTGGAG GGCGTGTGCG CAGACAGGGC CTTCTTCAAA
GACGGGAGGA TCCACCTCGT GGGCAGAGGC CGCGTGTGGC TATACGACGC CACCTTCAAC
AAGGTTGGAG AAGTGGGGCT AAGTTAA
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| Protein sequence | MLPTEGEGSV YFKYITFLTH GPEGAMWKLA AAVLALALLL ALAGGSPPQP TGAVEALQLP
VVNLSELRMV TGWSAVPTAL FYYAAADAAP AVAANVQVAG VDEEDYVKFD GERLYVAYRG
YVYVVGPDLS VEKRLPCPSS LVCYVFAWGN SVLAYSPTEA GTVLYLYGPW GRAVYNYSGY
PVSTRMRDGV VYIVAMGGVE AEINGAAVKE APLLSLGDPP ATLIVAAVDM RTGRFNAAAY
VSSAVSHVYM RGNRLYIAAP LSPYDLAYEA TKAVWERLPP EMRAVLDMEN VYTFYKTVRG
LLEWRGGEYL SYLNKANTTT ATKIYVFETE GVEARLKAVF IVPGRVLDQF AVEELGDRLV
VATTAAPVKF ELLRPPPADP FPSVIKREGL PTQIPPPSPP PVLYAAEGEP TNAVYLYTPD
GTLVVKAEGL ASGERIYAAR LVGSTLYLVT FRQADPLFAV DLSRGEPRVL GYLKTPGFSE
YLHPVAPGKL LGVGVYGDGV KIALFDVSNP AAPREVSNIT VPHSYTPIIF DHHAFAYSQG
VAVVPIRLQW RQCAVLAVEV GDGLTARTLE GVCADRAFFK DGRIHLVGRG RVWLYDATFN
KVGEVGLS
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