| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcal_1327 |
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| Symbol | |
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| ID | 4909622 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pyrobaculum calidifontis JCM 11548 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009073 |
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| Strand | + |
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| Start bp | 1244018 |
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| End bp | 1244875 |
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| Gene Length | 858 bp |
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| Protein Length | 285 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640125078 |
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| Product | SPFH domain-containing protein/band 7 family protein |
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| Protein accession | YP_001056215 |
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| Protein GI | 126459937 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0330] Membrane protease subunits, stomatin/prohibitin homologs |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.7737 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTTCTAC AGCTCGGAAC CTTAATCGCC GCGGCGGTCA TCGCCATCAT TATAGTGGCC
ATCCTCGCCT CCTCCATCCG CATAGTGCCC GAGTACATGA GGCTCGTCGT ATTCCGCCTG
GGCAGGCTAA TAGGCCTCAG AGGGCCCGGC CTCGTCTTCC TAATCCCCGT GATAGACCAG
GCTGTGCCCA TCGACTTGAG GGAGCAGGTC ATCGACGTGA CTAAGCAGAC GTGTATAACC
AAGGACAACG CCCCCGTGGA CATAGACCTC CTCATATACC TAAAGGTGGT AGACCCCGAG
AAGGTGGTCA CCCAGGTGCA GAACTTTAGG CAAGCCGCAG TGGGCATCGC CACCACGACG
CTGAGGGCCG TGGTGGGGGA CATAGAGCTA GACGAGGTGT TGGCAAAGAG GGAGTACATA
AACTCGGTCC TCAGGGCCAA GCTAGACGAG GTGACGGCGC GGTGGGGGGT GAAGGTGACG
GCGGTGGAGA TAAGAGAGAT AATCCCGCCG GCGGACGTCC AGTCGGCCAT GGTCAAGCAG
ATAGCCGCCG AGAGGGAGAG GAGGGCCATG ATAGCCCAAG CCGACGGAGA GAGACAGGCC
GCCATACTCA AGGCGGAGGG GCAGAAGCAG GCGGCGATTC TACAGGCAGA GGGGGAGAGA
CAGGCCGCGA TACTGCGGGC AGAGGGCCAG GCAAAGGCCC TGGAGCTGGT GAACGAGGCA
GCGATGAAGC TGAGCCAAAA CGCCATACTC CTCCAATACC TAGACGCCCT GCGCAACATA
GCCAGCTCCC CCTCCACAAA GATAGTGGTG CCCATGGAGC TACTAACGGC GCTACAGAAG
GTCTTAGGCA AGGAGTGA
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| Protein sequence | MFLQLGTLIA AAVIAIIIVA ILASSIRIVP EYMRLVVFRL GRLIGLRGPG LVFLIPVIDQ
AVPIDLREQV IDVTKQTCIT KDNAPVDIDL LIYLKVVDPE KVVTQVQNFR QAAVGIATTT
LRAVVGDIEL DEVLAKREYI NSVLRAKLDE VTARWGVKVT AVEIREIIPP ADVQSAMVKQ
IAAERERRAM IAQADGERQA AILKAEGQKQ AAILQAEGER QAAILRAEGQ AKALELVNEA
AMKLSQNAIL LQYLDALRNI ASSPSTKIVV PMELLTALQK VLGKE
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