Gene Pcal_1312 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcal_1312 
SymbolfabG 
ID4909468 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum calidifontis JCM 11548 
KingdomArchaea 
Replicon accessionNC_009073 
Strand
Start bp1229372 
End bp1230109 
Gene Length738 bp 
Protein Length245 aa 
Translation table11 
GC content62% 
IMG OID640125065 
Product3-ketoacyl-(acyl-carrier-protein) reductase 
Protein accessionYP_001056202 
Protein GI126459924 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only 
COG ID[COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.136779 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGGTGG CCGTTGTCAC AGGCTCTGGG AGAGGCATTG GGCGTGCCAT AGCGGTGAGG 
TTTGCGAGAG AGGGGTGGAG AGTGGTTGTA AACGCGAAGA AGGGGCGGGA GGAGGCCGAG
GAGACTCTCC GCCTTGTGAA AGAGGCGGGG GGCGACGGGG TTGTGGTAAT GGCCGACGTG
GCCACGCGGG AGGGCTGTAG GTCGTTGGCG CAGGCGGCCC TGGGGCTGGG CGGGCTAGAC
GTGTGGGTCA ACAACGCGGG GCTCGGCCTC TACTCCCCCT TTCTAAGCGC AGACGACCGG
CTCATCGAAA AGCAGTTAGA GGTGACGTTG AAGTCTGTGA TCTACTGCTC GCAAGAGGCG
GCGCGTGCCA TAAGGGAGGG GGTCATAGTC AACGTGGCCT CTATAGCGGG GATTAGGCCC
TTCCCCGGGC TGTCCATATA CAGCGCGGCG AAGGCTGCCA TTCTCAATCT TACGCAGGCG
CTCGCCGTGG AGCTTGCGCC TAGGATTAGG GTAAACGCGG TGGCCCCCGG CGTCGTCAAG
ACTAAGATGG GCGACAGCTT GCTCAAGATG CTGGGCCTCT CGGAGGAGGA GTTCGCCAAG
AGGTACACCC TGGTGGAGAA GATGGTGACT CCGGAGGATG TGGCAGAGGT GGTGTGGATG
TTGGTAAAAG TGCCGACAAT TACGGGGCAA GTGGTGGTGA TAGACGCCGG CGAGATGTTA
AAGGCCCAGT TGCACTAG
 
Protein sequence
MPVAVVTGSG RGIGRAIAVR FAREGWRVVV NAKKGREEAE ETLRLVKEAG GDGVVVMADV 
ATREGCRSLA QAALGLGGLD VWVNNAGLGL YSPFLSADDR LIEKQLEVTL KSVIYCSQEA
ARAIREGVIV NVASIAGIRP FPGLSIYSAA KAAILNLTQA LAVELAPRIR VNAVAPGVVK
TKMGDSLLKM LGLSEEEFAK RYTLVEKMVT PEDVAEVVWM LVKVPTITGQ VVVIDAGEML
KAQLH