Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pcal_1304 |
Symbol | |
ID | 4909230 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pyrobaculum calidifontis JCM 11548 |
Kingdom | Archaea |
Replicon accession | NC_009073 |
Strand | - |
Start bp | 1221713 |
End bp | 1222528 |
Gene Length | 816 bp |
Protein Length | 271 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640125057 |
Product | hypothetical protein |
Protein accession | YP_001056194 |
Protein GI | 126459916 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.0490188 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAAAGCTC TGTTGCTTGC CGCCCTCGCC GCCGTTCTCG CCCTTGCCCA GTGGGTTGCC TCTTTTAACC CAACGCCGGG GCCAGACTAC GCCCTCGCCG CGTGTCTCTT CGGCAACTAC GTCGCCGTTG TGGGGTACTC AGATCTGCCC CGGCAGTCCC CAGTCGTCGT CCTATTGGAT AGAGAAAGCG GCTCGGCGGC GGGTTGGCTG AGGGGAGAGA GCGGATACTT CGCCGCCTGC GCCTCCACGG GAGATGTGTT CTACGCCACG GGCCGTGGGG CTGTGGGCGC GGAGGTGCTT CCCGGCCGCT ACACTGTGAA AGCCACAGCA CCCGGCAAAG AATACGCCCA AACCGTGGAG GTGAAGCCAA GCCAAAACCA GACCCTCACG ATGCAAGTGC CCACTGCTGT GTTGAACATA GTCGTCTTAG ACGACGACAG GAGGTCAATT GACAGATACG TCACTGCTGT GGTTATAACC GGGCCGGTGG CTGTGGAGCT CTCCACGCCG CCTAGGGGGC TTGAGGTGCC GCCGGGCAAA TACACCATAC GCGTCACAGC CCTTGGCAGA GAGAGCCTGC CCGTCACCGT GGAAGTGGGG CCAGGCGAAG AGAAAACTGT GGAGGTCATA GTGCTGGGCA CCGCGGGCTA CGACCAATTG CCAGCACGAC CCACGCTGGT GGTGGTAACA TACGCCGTGG TCTTCTGGGC GCTCATCACC GCGTTTATAC TACTGTGGCA AGACGCGCGA CGCGGCCAAG TTAGTCCCTC CATTGATGAC CCACAGCCGC CAAGCGGGCC AGCCGCTGTA GCGTAG
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Protein sequence | MKALLLAALA AVLALAQWVA SFNPTPGPDY ALAACLFGNY VAVVGYSDLP RQSPVVVLLD RESGSAAGWL RGESGYFAAC ASTGDVFYAT GRGAVGAEVL PGRYTVKATA PGKEYAQTVE VKPSQNQTLT MQVPTAVLNI VVLDDDRRSI DRYVTAVVIT GPVAVELSTP PRGLEVPPGK YTIRVTALGR ESLPVTVEVG PGEEKTVEVI VLGTAGYDQL PARPTLVVVT YAVVFWALIT AFILLWQDAR RGQVSPSIDD PQPPSGPAAV A
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