Gene Pcal_1304 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcal_1304 
Symbol 
ID4909230 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum calidifontis JCM 11548 
KingdomArchaea 
Replicon accessionNC_009073 
Strand
Start bp1221713 
End bp1222528 
Gene Length816 bp 
Protein Length271 aa 
Translation table11 
GC content62% 
IMG OID640125057 
Producthypothetical protein 
Protein accessionYP_001056194 
Protein GI126459916 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.0490188 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAAGCTC TGTTGCTTGC CGCCCTCGCC GCCGTTCTCG CCCTTGCCCA GTGGGTTGCC 
TCTTTTAACC CAACGCCGGG GCCAGACTAC GCCCTCGCCG CGTGTCTCTT CGGCAACTAC
GTCGCCGTTG TGGGGTACTC AGATCTGCCC CGGCAGTCCC CAGTCGTCGT CCTATTGGAT
AGAGAAAGCG GCTCGGCGGC GGGTTGGCTG AGGGGAGAGA GCGGATACTT CGCCGCCTGC
GCCTCCACGG GAGATGTGTT CTACGCCACG GGCCGTGGGG CTGTGGGCGC GGAGGTGCTT
CCCGGCCGCT ACACTGTGAA AGCCACAGCA CCCGGCAAAG AATACGCCCA AACCGTGGAG
GTGAAGCCAA GCCAAAACCA GACCCTCACG ATGCAAGTGC CCACTGCTGT GTTGAACATA
GTCGTCTTAG ACGACGACAG GAGGTCAATT GACAGATACG TCACTGCTGT GGTTATAACC
GGGCCGGTGG CTGTGGAGCT CTCCACGCCG CCTAGGGGGC TTGAGGTGCC GCCGGGCAAA
TACACCATAC GCGTCACAGC CCTTGGCAGA GAGAGCCTGC CCGTCACCGT GGAAGTGGGG
CCAGGCGAAG AGAAAACTGT GGAGGTCATA GTGCTGGGCA CCGCGGGCTA CGACCAATTG
CCAGCACGAC CCACGCTGGT GGTGGTAACA TACGCCGTGG TCTTCTGGGC GCTCATCACC
GCGTTTATAC TACTGTGGCA AGACGCGCGA CGCGGCCAAG TTAGTCCCTC CATTGATGAC
CCACAGCCGC CAAGCGGGCC AGCCGCTGTA GCGTAG
 
Protein sequence
MKALLLAALA AVLALAQWVA SFNPTPGPDY ALAACLFGNY VAVVGYSDLP RQSPVVVLLD 
RESGSAAGWL RGESGYFAAC ASTGDVFYAT GRGAVGAEVL PGRYTVKATA PGKEYAQTVE
VKPSQNQTLT MQVPTAVLNI VVLDDDRRSI DRYVTAVVIT GPVAVELSTP PRGLEVPPGK
YTIRVTALGR ESLPVTVEVG PGEEKTVEVI VLGTAGYDQL PARPTLVVVT YAVVFWALIT
AFILLWQDAR RGQVSPSIDD PQPPSGPAAV A