Gene Pcal_1295 details

Gene Information

• Locus tag: Pcal_1295
• ID: 4908959
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pyrobaculum calidifontis JCM 11548
• Kingdom: Archaea
• Replicon accession: NC_009073
• Strand: +
• Start bp: 1211907
• End bp: 1212473
• Gene Length: 567 bp
• Protein Length: 188 aa
• Translation table: 11
• GC content: 68%
• IMG OID: 640125048
• Product: hypothetical protein
• Protein accession: YP_001056185
• Protein GI: 126459907

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: 16
• Fosmid unclonability p-value: 0.0609806
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

GTGACTTACC TCCTGGCGGC GGCTGGGGTC TCTATCTTGA GGTTTGTGAA GGTGACTGGG 
CCGGCGGGTA GGGTGGACGT CTCCTCCTGT CCCAGGCCGT GGGAGGTGCC GGAGCTCCAC 
ATGGCGGCGG CGCTTGGGGG AGTGGAGCTG GAGCTGGCGG CGTCGGACAC GGCGGAGGGG 
GTCGCGGCGG CTAAGGCGGT GCTTCTCTGC GCTGAGCGGC TTGGGGTGGC TAGGCCGGTG 
GGCTTCTTCG TGGTGAAGAG GTTTAGGCCG GGGTCTCTGG AGGGGGCGGC GGATCTCTTG 
GACAAGGCGG TGGTGCGTCT CCTGCGGAGG GGCGGCTACG TGGGGCTGAC CTCTGGCGCC 
AAGCCGCAGG TCTTCTACCT GCTCCTCGCG GCGTGGATTG CCGGCGCCCA GCCCGTCTAC 
GTGGACGTGG GGGGCGGAGT CCACCTCCTG CCTAGGGTTG AGGTGAGGGT GGATTCCCTC 
CCGAGGGAGC TCCTATACGC TGGGGATAGG CCGAGGGGGT GGGTGTTGGA GCTTATCCGA 
AGTGGGCGGC TCTCTTCTTT ACCTTGA 

 

Protein sequence

MTYLLAAAGV SILRFVKVTG PAGRVDVSSC PRPWEVPELH MAAALGGVEL ELAASDTAEG 
VAAAKAVLLC AERLGVARPV GFFVVKRFRP GSLEGAADLL DKAVVRLLRR GGYVGLTSGA 
KPQVFYLLLA AWIAGAQPVY VDVGGGVHLL PRVEVRVDSL PRELLYAGDR PRGWVLELIR 
SGRLSSLP