| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcal_1293 |
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| Symbol | |
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| ID | 4908768 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pyrobaculum calidifontis JCM 11548 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009073 |
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| Strand | - |
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| Start bp | 1207967 |
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| End bp | 1210846 |
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| Gene Length | 2880 bp |
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| Protein Length | 959 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640125046 |
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| Product | hypothetical protein |
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| Protein accession | YP_001056183 |
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| Protein GI | 126459905 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.0239018 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGTTGCTTG CAGACCTCTT TGAACGCTTA GTAAACCAGG CGGCGGAGGA CGTGGCAAAA
GAACTCTGCG GAGCCATCCC CGGGACAGAC GTTGTGATAT TAGTAACGCC GGGCTCAGCC
CGACACGAAG TGGCAAGAAG AGCGGCGGCA AAGTGCGACA CCCCCGTCAA AATCCTAACA
TACAAGGCAG ACGAACCCGG CACAGAACCC CTCGACAAAG ACAAAATACT CAAAGAAGAC
GCCAAGGTCA TAGCCATACC CCTAGACAAC CTGGCCGCAC GAGATCTCTA TCAACACCTT
GCCACAAAAC GCAGAAAAGT CATAGACCTG CCCTCCATCT ATCAACGGCT TCTAGGAAGT
AGCTACAACT ACGCCAAAGT ACGCTACAAG AAGCTAAGAC ACATTGCAAA AACAACAGAA
GGCATCTCCA TATCTCTACT TCAGCTAAAC CCCCTAGAAG TTGAAAAAGG CATAAAAGCC
ATAAGAAGGC TACGTCCACG ACAAAGAAGC GCAAAGGAGC TATTAGCCGA AGTGCTAGAA
GACTTGGCAA CAAAAGTTGG AGCCCAGCTA GTTGCAGAAG TCCTTCACCT CGGAATAGAG
CTACTGGAGA GATCTGGCAC AGGTAGCTGG CTCATAGACA AAGTGCACAA GCTATCCAGC
CGGCTGGGAA TCAGAAGCGA GGACCTACTA GAAAAACTCT TGACAAAAGG CAGAGCACGC
GACCACTTTA TCGAGGCGGT GGTACAATTC GCCAAAGCCG CCGCAGAAGC CAGCCCCTAT
CTACAAAACC CCAGTTTCGA AGCCGTAGTA GCCGAGGTGG CCAACGACGG GTGGGGCCTA
AGCATAGAGA AGTTCAAAAC CCTCGCAGAA AACGCCGCAA AGCTTCTCCG CTCTAAAATA
GCCACAAAAG ACGACATAGA AAGGCTGAAG AAAGAGCTGG AAGACAGACT AGACAAAGCG
TGGAAAGAGC TCGAAAAACT CAAGAAAAGG GTAGAAGAGG CTGAAACCGA GTTGCAAGTA
TTAGGAATAG TAAGCGAAGT ATGGAAGAGG CCGAAGGACC TCGGCTTCGA TCTAGAGAGG
GGGGTCTTCC ACGTCTATGG TTCGGACAAG CCCCTAGTAG TCACAGACAG CTTCGCAAAG
CAGGCGGAGG AAATATTAGA CGGGATACGC GAAGGCAAAT TTGTCGTCGT ACGGGGAGAG
AAGGGCATCG GCAAATCTAC GCTGACGCTA TACGCCCTAG CCAAGGCACT AAGCACAGGA
AACTTCCGCG TATACAAGAT AGGCCCGACG CATAAGGAGC CAACCGAGGA ATTCCACAAA
CTCAGCATAA CGGTGAAGAT GGCACTCCAC ACTCCCGTAC TCTTCTACGA CCCAGCCACA
CCCCCGTACT ACGAAGCGCC TTCTGACGCG CCTCAGCCCA CGGCTATAGG CCAAATAATC
CGACACCTCC TAGACCTACA CGAGAGGTTG CTAGAGGAAG GCAGCCCCAT ACCCGTGGTA
GTGGTACTGC CAAACGACAT ATACGCTACA TTGCCCAGTG AACTCAAACA ACGCCTTGAC
GCCCACATGG CAGTGGAGGT AGACCTACGC CAGCCCCAAT TCCTAGCAGA AATCGTAAAA
GCATACAGCG GCACCACGTG CAAAGACGAG GTATATCAAA AAATCGGACG TGAAATAGCC
GAGAAATACG AAGGCGGCTA CACCCTAGTG GCCAGATATG CCGGCGAGTG GCTAAGACAG
GCAGGTTGCG CAACCAACGT GGCAAAAGCC GTAGAGGCAG GCGGCGGCAA CGCCAAGACC
TTCCTCGCCC TGTACATATA CAAAGGCATT TTCCAAGGCG ACAGCCGGCT CTTATGGGCC
CTCGCAATAC CCTTCCTCGC CCGCGCCAAA CTCGGCCCCA TGCCCCCAAA GTGGCTAGAA
GAAATCCCAC AAATAGACCC AAGAGACAAC ACACTATACT GCAACACCCC ACTCCACAGC
GTCCCAATCC AGGGAGGCGA CGAAGCAAGG GAATTCATCA AGAAGTGGCT AGCAGAAGAA
CATGAAGACT TAATCGAAGA AGTCATAAAA GAACTAGCCC AAGGCACCTT ATCCGCACAG
GTAGAGCCAA TGCTAAAAGG AAAGACAGCG CTTAAATATA TAATGAATAT CGAGAACACA
CTCGCCGAAG TAGCAGAAAG ACTAAAGTCG CCAGCCAGAG TAGTCGGCAA CTGTGGAGGA
GGAGACCCCG TCGACGTACT CTTCGAACAA CTTGCACAAA GGAAAGAACT AAGAGAAGCA
ATAGAAAGAC ACACCTGGGA ATTCCTTGAA GCAGTGGGTG AATCCTTGTT GAATGTAAGA
GTAGAATTAG TTTATCCGAA GATAAAATCT CAGAGGGGCG ATCTTGGCGA ATGGATATTT
GTAGATAACT ACATGCCGTT ATCTGTAATT TTATTTTTAC AAAAATCAGT ACATAGATTT
ACCTATATCA TTGACCACTG TCAAGCTATA GAACATCTCC ACCAAAGAGC CATAGAAAGA
GGAGAACTAC TTGAACCGAC ACCCCTAGCC ATCTTAGCTC TCTCGAAAGG CAGACTAGGG
CAATGCATAG ACAAGGCATG GAAAGTACTC GCCAAACAGA TAGGAAACAT CATACCAACA
GAAGAGGCAC TGACATGGGC CAGGGAGTTC ATACGCCATC TAATTGAAAG GGAGATGTTC
AACGAGGCCG CCGTCATTAT TGCTCAGCTA TCCTCCTATG ACCAAAACCT TGTAAAGTTT
ATCGAACCTA GCAAATTAAA TTGGATTGGA AAAATTTACT ATGGAAAAGC TCTAATAAGT
TTACTATATA ACACAGAGAT AACAGAACAC AAATACATGA TTGAGAAAAT CGAAGAATAA
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| Protein sequence | MLLADLFERL VNQAAEDVAK ELCGAIPGTD VVILVTPGSA RHEVARRAAA KCDTPVKILT
YKADEPGTEP LDKDKILKED AKVIAIPLDN LAARDLYQHL ATKRRKVIDL PSIYQRLLGS
SYNYAKVRYK KLRHIAKTTE GISISLLQLN PLEVEKGIKA IRRLRPRQRS AKELLAEVLE
DLATKVGAQL VAEVLHLGIE LLERSGTGSW LIDKVHKLSS RLGIRSEDLL EKLLTKGRAR
DHFIEAVVQF AKAAAEASPY LQNPSFEAVV AEVANDGWGL SIEKFKTLAE NAAKLLRSKI
ATKDDIERLK KELEDRLDKA WKELEKLKKR VEEAETELQV LGIVSEVWKR PKDLGFDLER
GVFHVYGSDK PLVVTDSFAK QAEEILDGIR EGKFVVVRGE KGIGKSTLTL YALAKALSTG
NFRVYKIGPT HKEPTEEFHK LSITVKMALH TPVLFYDPAT PPYYEAPSDA PQPTAIGQII
RHLLDLHERL LEEGSPIPVV VVLPNDIYAT LPSELKQRLD AHMAVEVDLR QPQFLAEIVK
AYSGTTCKDE VYQKIGREIA EKYEGGYTLV ARYAGEWLRQ AGCATNVAKA VEAGGGNAKT
FLALYIYKGI FQGDSRLLWA LAIPFLARAK LGPMPPKWLE EIPQIDPRDN TLYCNTPLHS
VPIQGGDEAR EFIKKWLAEE HEDLIEEVIK ELAQGTLSAQ VEPMLKGKTA LKYIMNIENT
LAEVAERLKS PARVVGNCGG GDPVDVLFEQ LAQRKELREA IERHTWEFLE AVGESLLNVR
VELVYPKIKS QRGDLGEWIF VDNYMPLSVI LFLQKSVHRF TYIIDHCQAI EHLHQRAIER
GELLEPTPLA ILALSKGRLG QCIDKAWKVL AKQIGNIIPT EEALTWAREF IRHLIEREMF
NEAAVIIAQL SSYDQNLVKF IEPSKLNWIG KIYYGKALIS LLYNTEITEH KYMIEKIEE
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