Gene Pcal_1265 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcal_1265 
SymbolfabG 
ID4909645 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum calidifontis JCM 11548 
KingdomArchaea 
Replicon accessionNC_009073 
Strand
Start bp1174784 
End bp1175479 
Gene Length696 bp 
Protein Length231 aa 
Translation table11 
GC content64% 
IMG OID640125018 
Product3-ketoacyl-(acyl-carrier-protein) reductase 
Protein accessionYP_001056155 
Protein GI126459877 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only 
COG ID[COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.116043 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGGCTGA GGGGTAAAAA CGTAGTAGTA GCAGGCGCCG GCCCCGGCCT AGGCACAGCG 
GTAGTGCGCC TAGCCATCGC AGAGGGCGCC TCGGTATACG CCTTCGCCAG AACCCCCAAG
CCCCACCTAG CCAAGCTCGG GGCACGCATG GGGACACGCG ACTTCTCCAA GCCAGAGGAG
GCAAAGGCCG CCGCCGAGGA GGCCGCCAAG GCCTTCAACG CCGTACACGG CCTAGTAGTG
ACAGCGGGGG GATACGCCGC GGGGGGAGTG GAAGAGGTGG GAGAAGCCGA GCTAGAGGAC
ATGCTCGCCA GAAACCTAAA AGCCCACATA TACGCCGTCA AGGCCATCCT CCCCCTAATG
CCCCCCGGCT CCTCCATAGT CCTCACCTCC TCCATAGGCG GGACATACGC CGCGTGGCCC
AGACACGTGG CCTACGTAGC CGCCAAAGCC GCCCTAGCCA AGGCAACTGA GTCCATAGCC
GCGGAGCTCC TCGACAGAGG CATACGAGTA AACGCCGTGG CCCCCGGCGG AATGGCCAAA
GAAGACAACC CAGACGCCCA GCCCCCACCC CTAGGAGCCC CCCAGGCACC CCCCGCCGAA
GTGGCCAAGG TAATAATCTG GCTCCTCACA GACGAAGCCA GGTGGATAAC CGGAGCCATC
ATACCCGTCG ACGGAGGAAG AAGACTAAGA GGATAG
 
Protein sequence
MRLRGKNVVV AGAGPGLGTA VVRLAIAEGA SVYAFARTPK PHLAKLGARM GTRDFSKPEE 
AKAAAEEAAK AFNAVHGLVV TAGGYAAGGV EEVGEAELED MLARNLKAHI YAVKAILPLM
PPGSSIVLTS SIGGTYAAWP RHVAYVAAKA ALAKATESIA AELLDRGIRV NAVAPGGMAK
EDNPDAQPPP LGAPQAPPAE VAKVIIWLLT DEARWITGAI IPVDGGRRLR G