Gene Pcal_1263 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcal_1263 
Symbol 
ID4909643 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum calidifontis JCM 11548 
KingdomArchaea 
Replicon accessionNC_009073 
Strand- 
Start bp1173705 
End bp1174319 
Gene Length615 bp 
Protein Length204 aa 
Translation table11 
GC content66% 
IMG OID640125016 
Productoxidoreductase, molybdopterin binding 
Protein accessionYP_001056153 
Protein GI126459875 
COG category[R] General function prediction only 
COG ID[COG2041] Sulfite oxidase and related enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.164998 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGAGTGTA GGGAGATTAG GGTGGATAGG CCTTGGCCGC CTAACCAGTC CCGGGTGAGG 
CGGTTTGTGG TTTACGACGT GTTTGACCCG CCTGACGTGC CGCCTGAGAG GCACGTGGTC 
AGGGTGGTGG GGGCTGTGGA GAGGCCGGTG GAGGTGCCGC TGGTGGAGCT TCAGCGTAGG 
TACCCCTGTG TGGAGGTGGT GGCGCCGTTT CACTGCGTCA CGGGGTGGTC TGTGGAGGGG 
GTGAGGTGGA GGGGGGTGCA GGTCCGGGCC TTGCTTGAGG AGGCTAGGCC GTATGGGGGC 
TACGCCTTGG CGTGGGGGGT GGATGGGTAC AGCGCCTCTC TCCCCGTGGA GGCCCTCTGG 
GAGGAGTCCA CGATCATCGC CTGGGCTTTG AATGGGGAGC CTCTTCCCAA GAAGCACGGT 
GCGCCGGCGA GGCTGGTGGT GCCGACTCGT TATGGGTGGA AGAGCGTGAA GTACTTCACG 
GCTATCGAGG TGTTGGAGGA GCCGGTGCCG GGGTACTGGG AGGCCTTGGG CTACTCGCTT 
AACGGCGACC CCTGGCGCGA GGAGCGGTTC GACTTCGGCC GCCCGGCGAT GCGGGGGAGG 
AGGGTGGGGT TCTGA
 
Protein sequence
MECREIRVDR PWPPNQSRVR RFVVYDVFDP PDVPPERHVV RVVGAVERPV EVPLVELQRR 
YPCVEVVAPF HCVTGWSVEG VRWRGVQVRA LLEEARPYGG YALAWGVDGY SASLPVEALW 
EESTIIAWAL NGEPLPKKHG APARLVVPTR YGWKSVKYFT AIEVLEEPVP GYWEALGYSL 
NGDPWREERF DFGRPAMRGR RVGF