| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcal_1261 |
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| Symbol | |
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| ID | 4908223 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pyrobaculum calidifontis JCM 11548 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009073 |
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| Strand | + |
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| Start bp | 1171322 |
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| End bp | 1172890 |
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| Gene Length | 1569 bp |
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| Protein Length | 522 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640125014 |
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| Product | peptidase S49 |
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| Protein accession | YP_001056151 |
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| Protein GI | 126459873 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0616] Periplasmic serine proteases (ClpP class) |
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| TIGRFAM ID | [TIGR00706] signal peptide peptidase SppA, 36K type |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.21154 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGAGGTT GGATAGCCAT AGCGGTGATC CCAGCCATAG CCGTGGCGGC CATACTCGCC
TACCTAGCCC TCCACCCGCC AGCCCCAGCG CCGCCGCCCA AGATCGTGGT GGCCACACTG
GACTTCGTCA TACAGAGCCC AGACGCCGGC GCCCTGGCGC AGAGGCTAGT GGAGCTCTCC
CAGAGGGGAG ACGTGGCGGG GGTCGTCCTC GTGATCAACT CGCCGGGCGG CACTGTCTCA
GACACAGAGG CCCTCTACGC CACTCTGCGC GGCCTCGGCA AGCCCAAGTA CGCGGTGGTT
TACGGCCTAG CCGCTTCGGG GGCCTACTAC GTCGCCGCCG CGGCGGACAA GATATACGCC
ACGCCCTCCA GCTGGGTGGG GAGCATAGGG GTAATAGCCG TCATATGGCC CGACGAGTAC
CTCTACGACG CCCCAGACTA CGTATACACC ACCGGGCCCC TGAAGTACTA CGGGATGGAC
CTCACCTCCT TCTACAACGC GGTGGAGGAG GTGCGGAACA ACTTCGTAAA GGCAGTCGCC
GAGGGGAGGA GGGGGAGGCT GAGGGTAAAC GCCACGGAGC TGGAGACCGC CGCCCTCTAC
ACCGCCAGCC AGGCCCTGGA AATGGGGCTA GTGGACAAAA TAGGCGGTGT CCCCGACGCG
GTGAGAGACA TGGCACAGGA GCTCGGCCTA AGAGAGTACC AAGTGGAGTA CCTCAAGCCC
CTAAACGCCA CGCAGGGGCC CGCCTCCCAG AGGGCCTCCC TATCCGCCCT CCTAAACTCC
ACCCCGCTCC CCATCTTCTA CATGTGGCCC CCCGCCCTGC AGATCGACAT TAGGCAACAG
CAAGCCTCCC TGCCCGCCGT CTCCGAGGTC CCCGCCGGCA GGCGCTACGT GGTGCTAGAC
GCCGCGCACA GCAACGTGGT GCCCAAGGGC TTCCTAGAAG TCCTCCGCGC AGAGTTGGCC
AAGAGGGGCT ACGCCCTAGT CGCCGCAGCC ACCGAGGACA GACTCGCCGC CCTCCTCTCC
AACGCCACAG CCCTAGTGGT GGCAAACCCG GCAACGCCCT TCTCGCCCAC CGCCGTCAAG
GCCGTCCTCA ACGCCACGAA GAGAGGCGTC AAAGTGGCCT ACTTCTACGA CGTGAGGGCA
AGCGGCATAG TCACAATAGG GGGAACGGCG TACATTGCCC CATACGGCGC AGTGGCGGCC
CCCGACACGT TGCCCATGTA CTTCAACATG TCGGGACTCC GCGCCGTCTA CAACTACACA
ACCGGGGCAA CGGCCTTCGA CCAAAACTGG CAAATAGTGG CCGTGGAGGC CAGAGGCAAC
TGGACGCTGC TCAGTGGGGC GGCGCGGCTA GTCCTCTTCA GCCCCTCCGC CGTCGCCACA
AGCGCCCCCC ACAGACTTGA GGCGTGGGCA TACGCCTTCG GCTACGGGTG GGGCAACTAC
ACAATTGCAG CGCAGGTGGG CAACTTCCTC TTCGTCGGCG CAGTGAGGTC CTTCACCCCC
TACTTCATAC AGCTGGGAGA CAACCACAAG TTCTTCTCCA ACGTAGTGGA CTGGCTGACG
TCGCAGTGA
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| Protein sequence | MRGWIAIAVI PAIAVAAILA YLALHPPAPA PPPKIVVATL DFVIQSPDAG ALAQRLVELS
QRGDVAGVVL VINSPGGTVS DTEALYATLR GLGKPKYAVV YGLAASGAYY VAAAADKIYA
TPSSWVGSIG VIAVIWPDEY LYDAPDYVYT TGPLKYYGMD LTSFYNAVEE VRNNFVKAVA
EGRRGRLRVN ATELETAALY TASQALEMGL VDKIGGVPDA VRDMAQELGL REYQVEYLKP
LNATQGPASQ RASLSALLNS TPLPIFYMWP PALQIDIRQQ QASLPAVSEV PAGRRYVVLD
AAHSNVVPKG FLEVLRAELA KRGYALVAAA TEDRLAALLS NATALVVANP ATPFSPTAVK
AVLNATKRGV KVAYFYDVRA SGIVTIGGTA YIAPYGAVAA PDTLPMYFNM SGLRAVYNYT
TGATAFDQNW QIVAVEARGN WTLLSGAARL VLFSPSAVAT SAPHRLEAWA YAFGYGWGNY
TIAAQVGNFL FVGAVRSFTP YFIQLGDNHK FFSNVVDWLT SQ
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