Gene Pcal_1243 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcal_1243 
Symbol 
ID4910270 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum calidifontis JCM 11548 
KingdomArchaea 
Replicon accessionNC_009073 
Strand
Start bp1158032 
End bp1158292 
Gene Length261 bp 
Protein Length86 aa 
Translation table11 
GC content57% 
IMG OID640124996 
Producthypothetical protein 
Protein accessionYP_001056133 
Protein GI126459855 
COG category[S] Function unknown 
COG ID[COG2250] Uncharacterized conserved protein related to C-terminal domain of eukaryotic chaperone, SACSIN 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.91615 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTGGGCAG ACGCGAAGTG GAGCATCTCA GGAGGCGGGC TTTTGAGTTA TTGGAGGCGG 
CGCGGGACGA CGTTGAAAAA GGCAGTTGAC TTGGCGGCTT TTCACGCCGA GCAGGCTCTT
CAGCTTGCCT TGAAGTGCCT CCTGGCGCGC GACTACGGGC ATTATCCCCA TACGCACGAC
TTGAGGGACT TTGAACTTGG AGGAGAGGCC AGAGGTTTGG GACTTCTATG GCCAATAGGT
ACGCCGTGGA GATCTTGGTA G
 
Protein sequence
MWADAKWSIS GGGLLSYWRR RGTTLKKAVD LAAFHAEQAL QLALKCLLAR DYGHYPHTHD 
LRDFELGGEA RGLGLLWPIG TPWRSW