Gene Pcal_1235 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcal_1235 
Symbol 
ID4909865 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum calidifontis JCM 11548 
KingdomArchaea 
Replicon accessionNC_009073 
Strand
Start bp1150519 
End bp1150920 
Gene Length402 bp 
Protein Length133 aa 
Translation table11 
GC content64% 
IMG OID640124989 
Productvitamin K epoxide reductase 
Protein accessionYP_001056126 
Protein GI126459848 
COG category[S] Function unknown 
COG ID[COG4243] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.670787 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGGTTTC TCCCCTCGCT GGCAGGCCTG TCGGCTGGGA TCGCCCTGGC CCTACTGGGC 
CTAGGACAAG CCGCGCTTTG GGCGTTGGCG GCCACTGGCG TCTTTCACGC CCTGTTTCAG
AAGCCGCAGG CGCTTTGCGC AAAGGGCGGG GGGTGTGAGA AAGTTCTCTC ATCCCCATAT
GCGAGGCCCT TCGGCGTGCC CATGGAGGTG CTCGGCGCGG CGTGGTTCAT AGGCGTGCTG
CCGGCGTACT ACCTCGGCGC GGGGCAACTT TGGGCGTTTA TAGGCATAGC AGGCGTGGCC
GTGCTTACGG CCATTGAGGC AAAGCTGAGG GCCTTCTGCG CCTACTGCAC AGTGGCCCAC
CTAATAGGCC TTGCCGCAGC CGCCCTATTG CTGTCGGCGT AA
 
Protein sequence
MRFLPSLAGL SAGIALALLG LGQAALWALA ATGVFHALFQ KPQALCAKGG GCEKVLSSPY 
ARPFGVPMEV LGAAWFIGVL PAYYLGAGQL WAFIGIAGVA VLTAIEAKLR AFCAYCTVAH
LIGLAAAALL LSA