Gene Pcal_1232 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcal_1232 
Symbol 
ID4909855 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum calidifontis JCM 11548 
KingdomArchaea 
Replicon accessionNC_009073 
Strand
Start bp1147784 
End bp1148221 
Gene Length438 bp 
Protein Length145 aa 
Translation table11 
GC content61% 
IMG OID640124986 
Productcarbon monoxide dehydrogenase subunit G 
Protein accessionYP_001056123 
Protein GI126459845 
COG category[S] Function unknown 
COG ID[COG3427] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.304231 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCGTAG AGGAGTCTGG ACAATTCGCC GTCCCCAAGC CCCCCGCCCA GGTTGTAGAA 
CTGTTAAAAA ACCCCGAGGC GGTGGCCAAG CTGATACCTG GGGTCACCAA GGTTGAGAAG
TCCGGCGACG AGTACGTGGG AGAGGCCACG GTGAAGCTGG GACACCTCTC GGGCAAAATG
GCCGTCCGCT TCCGGTACAC CTACGTGGGG GACGACGGCG TAGACGTGGC GGGGAGGGCG
ACCGGCCTCC AGACCACCGC CGACTTCAAA ATATCGGCCC GTGTAGAGCC CAGCGGCGGC
GGGTCCCTCG TGAAGTGGCG CTTTGAGGGA GACGCGCGGG GCCTAGCCGC CTCTCTGGCA
CCGAGCATTG TAAAAAACGC GTTAAGGTCC ATGGCCACAG AAGCCGTCAA CAATTTAGCC
AAATATCTAT CCAGTTAG
 
Protein sequence
MRVEESGQFA VPKPPAQVVE LLKNPEAVAK LIPGVTKVEK SGDEYVGEAT VKLGHLSGKM 
AVRFRYTYVG DDGVDVAGRA TGLQTTADFK ISARVEPSGG GSLVKWRFEG DARGLAASLA
PSIVKNALRS MATEAVNNLA KYLSS