| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcal_1229 |
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| Symbol | |
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| ID | 4910158 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pyrobaculum calidifontis JCM 11548 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009073 |
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| Strand | - |
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| Start bp | 1143441 |
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| End bp | 1144505 |
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| Gene Length | 1065 bp |
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| Protein Length | 354 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 640124983 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_001056120 |
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| Protein GI | 126459842 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG1173] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.227271 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGATCC TCGACAGAGC CGCGGACCTA TTGATATCGC TGTTGGTGAA GCTCATCACG
CTGGTTAGGA GAGACTGGTA TGCGAAGAAT AGGGCGAGGG TGGAGGAGTG GCGTCTAACT
CTGTACGCGC TTAATAGATC GCCCACGGGG GTCGCGGGCC TCATACTCTC CATGGGGTTT
GTAGTCGTCG GAATCGTCGG CCCCTTTGTG GCCCCCTACG GCTACGACCA GTTCCTCTAC
TTAGAAAACC CGGACCTGTA TCTAGCCCCT CCTGGGTCCT ACGGCATGTT GCTGGGCACG
GACATCTACG GGAGAGACGT TCTCAGCCTC ATGCTCTACG GGGCGAGGGT CTCGCTTGTG
ATTTCTGTGG TTACAATCGC CCTGGGTGTG CCTCTGGGGA TTTTGCTGGG CCTCATCGCC
GGCTACTACG GCGGGAAGAT AGACGAGGCT ATCATGAGGG TGACAGACAT GTTCCTCGCC
TTCCCAGCGC TTGTCCTCGC GCTTGCGCTC GCCGCGACTC TGCCCCAGAG GATTAGGGAG
GCGTTGGTGG AGAACCAAGC CTTTGCATAC GCCATGGCTG CGATCTTCGG CGTAAAGCCC
GACGACGCTA TCCACCTCGC GCCTCTCATC TCCATCTTCA CAGCATTGAT AATTGTGTGG
TGGCCCACCT ACGCGAGAGT CGTTAGAGGA ATGGTTTTAG TAGAGCGTGA GAAGACCTAC
GTGGAGGCGG CTAAGGCGCT GGGGTACTCC TCTTGGAGGA TTATGACGAG GCACATTTTG
CCCAACATAA TGTCCCCAGT GGTTGTGTTA ATAACCTTCG ACTTCGCCTC GGTGAACTTG
CTCGCGGCGG GGCTAAGCTT TTTAGGCCTC GGCGCGCAGC CCCCCATAGT GGATTGGGGC
TCTCTCATAA ACATGGGCGG TAGCCGCTTC CCCACTGCGT GGTGGCTTGT GTTCTTCCCA
GGTGTCGCCA TTTTCCTGAC GGCACTGGGG TGGAACCTCC TTGGGGACGC TCTACGCGAC
GTGTTTGACC CCAAGTTTAG GAGGAGGATA GAGTTTAGGG TATGA
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| Protein sequence | MKILDRAADL LISLLVKLIT LVRRDWYAKN RARVEEWRLT LYALNRSPTG VAGLILSMGF
VVVGIVGPFV APYGYDQFLY LENPDLYLAP PGSYGMLLGT DIYGRDVLSL MLYGARVSLV
ISVVTIALGV PLGILLGLIA GYYGGKIDEA IMRVTDMFLA FPALVLALAL AATLPQRIRE
ALVENQAFAY AMAAIFGVKP DDAIHLAPLI SIFTALIIVW WPTYARVVRG MVLVEREKTY
VEAAKALGYS SWRIMTRHIL PNIMSPVVVL ITFDFASVNL LAAGLSFLGL GAQPPIVDWG
SLINMGGSRF PTAWWLVFFP GVAIFLTALG WNLLGDALRD VFDPKFRRRI EFRV
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