| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcal_1212 |
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| Symbol | |
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| ID | 4908415 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pyrobaculum calidifontis JCM 11548 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009073 |
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| Strand | - |
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| Start bp | 1123407 |
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| End bp | 1124084 |
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| Gene Length | 678 bp |
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| Protein Length | 225 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640124966 |
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| Product | hypothetical protein |
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| Protein accession | YP_001056103 |
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| Protein GI | 126459825 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1738] Uncharacterized conserved protein |
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| TIGRFAM ID | [TIGR00697] conserved hypothetical integral membrane protein |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.455556 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCTCGCCT TGGCGGTGGC GTGGGCCTAC GGCCTCGTCA TATACGCAAT ATACCTCTTT
TTAATCCGCC TGTGGAGGGA CAGGGCGGAC TTGGTGCTTG TGGGGCTGTT CTTCGGCACT
CTCTCCGCGG CGCAGTTTAT AGCCAACAAG CTGGTGGACT ATGGAATAGG CGTTGCCCCG
GCGGGCACAG TCATCTTCAT GACCAACGTG GCCGTGTTAG ACGCCATGGC GGTCTTCTAC
GGGAGGAGCT TCGCATTGAG GGCCGTGAGG CTCGGCTTCT TCTTCCAAGC CGCGGTGGCC
TTCGCCGCCT GGGCGGCCTC CACCCTCCCG CCTCCCGCCT GGTTCGCCGA GAGGGCGGCC
GTGGTAGACA GCGTCTTGGC GCCGTCGGCG AGGATAGCCG CGGCCTCGCT CACGGCCTAC
CTCATCTCCT CGACCGTGGA CGTGTACATT GTCACCAAGT GGCCCCGGCT ACACATCTTG
GCCAGAGTCT ACTCCTCCTC CCTCGTGGCC CAGGTGGTGG ACAGCTTGGT GTTCATATCC
CTCGCCTTTG GCCCCGAGGC CTCGGTAATA ACGGGGCAGA TCTTGGTGAA GTGGGCCCAA
ATCCCCCTGG AGGCGGTGTT GATATACGGG GCCCGGCGGT ACGTGAAGGC TATCGTAGCC
CAACAAGCGC CTGCTTAA
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| Protein sequence | MLALAVAWAY GLVIYAIYLF LIRLWRDRAD LVLVGLFFGT LSAAQFIANK LVDYGIGVAP
AGTVIFMTNV AVLDAMAVFY GRSFALRAVR LGFFFQAAVA FAAWAASTLP PPAWFAERAA
VVDSVLAPSA RIAAASLTAY LISSTVDVYI VTKWPRLHIL ARVYSSSLVA QVVDSLVFIS
LAFGPEASVI TGQILVKWAQ IPLEAVLIYG ARRYVKAIVA QQAPA
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