| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcal_1208 |
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| Symbol | trpD |
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| ID | 4908272 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pyrobaculum calidifontis JCM 11548 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009073 |
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| Strand | + |
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| Start bp | 1119885 |
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| End bp | 1120868 |
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| Gene Length | 984 bp |
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| Protein Length | 327 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640124962 |
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| Product | anthranilate phosphoribosyltransferase |
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| Protein accession | YP_001056099 |
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| Protein GI | 126459821 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0547] Anthranilate phosphoribosyltransferase |
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| TIGRFAM ID | [TIGR01245] anthranilate phosphoribosyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.88592 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | TTGCTGAAGA AGCTGGGCGA GGGCAAGACT CTAACGGTGG ACGAGGCCTA TAGGCTTGCC
CGGGGCATTC TCCTCGGCGA GTTGGGGGAG GTGGAGGTGG CGGCGGCTTT GACGGCGATG
AGTGTGAGGG GGGAGACGGG GGAGGAGGTG TTGGGGTTTG TGAAAATGGC CAGGGAGGCG
GCTGTCAGAG TCCCCCTGGA GGTAGACGCC ATTGACACGG CGGGGACTGG GGGCGACGGC
GCTGGGACTA TAAACTTGTC CACGGCGGCG GCCATAGTCG CCGCGGCGGC TGGGGCCAAG
GTTCTTAAGC ACGGGAACAG ATCCGCCTCT GGCCTCTTTG GGAGCGCGGA CTTCATGGAG
GCTGTGGGGT ACAACCTCGA CCTCCCGCCC GAAAAGGCGG CTAGGCTCGT GGCGACTGTG
GGCTTCGCCT TTGTCTTTGC CCCAAAGTAC CACCCAGCCT TTGCCAAAGT GGCGCCGGTG
AGGAGGAGGC TCCCGTTTAG GACTATATTC AACGTGGTGG GGCCTTTGGC AAACCCGGGC
TGTGTGAAGA GGCAGCTGGT GGGCGTGGCT GAGCCGAGGC TGTTGGAGGT GGTGGGGGAG
GCCTTGGCCG GAATGGGCCA CGTCAAGGCG CTCGTGGTGC ATGGGGGTGG GGTAGACGAG
GTGTCTACGG AGGGTCCGAC TACGGTGGTG GAGGTGAGGG GGTTTAAGCT GGAGCGGTAC
GTGGTGTCGC CGGGGGACTT CGGGGCGCCT GTCACACCAC TGCCCAGGGC TAGGTCTAGG
GAGGAGGCGG TGGCCAGGGC CTTGGCTGGG CTGAGGGGGG AGGATAGAGA GGCGGCGGTG
GCCATTGCCG CAAACGCCGG CTTTGCCCTA TACGTCGCCG ACGTGGTTAA GGACTTTAGA
GACGGGTTTG AGCTGGCGTT GAAGACTATA GAGGAGGGGG CGGCGTATAG AAAGCTGGTG
GAGGCGGTGG AGGCGTCGCG ATGA
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| Protein sequence | MLKKLGEGKT LTVDEAYRLA RGILLGELGE VEVAAALTAM SVRGETGEEV LGFVKMAREA
AVRVPLEVDA IDTAGTGGDG AGTINLSTAA AIVAAAAGAK VLKHGNRSAS GLFGSADFME
AVGYNLDLPP EKAARLVATV GFAFVFAPKY HPAFAKVAPV RRRLPFRTIF NVVGPLANPG
CVKRQLVGVA EPRLLEVVGE ALAGMGHVKA LVVHGGGVDE VSTEGPTTVV EVRGFKLERY
VVSPGDFGAP VTPLPRARSR EEAVARALAG LRGEDREAAV AIAANAGFAL YVADVVKDFR
DGFELALKTI EEGAAYRKLV EAVEASR
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