| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcal_1206 |
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| Symbol | |
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| ID | 4908464 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pyrobaculum calidifontis JCM 11548 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009073 |
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| Strand | + |
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| Start bp | 1118241 |
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| End bp | 1119482 |
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| Gene Length | 1242 bp |
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| Protein Length | 413 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640124960 |
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| Product | tryptophan synthase subunit beta |
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| Protein accession | YP_001056097 |
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| Protein GI | 126459819 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1350] Predicted alternative tryptophan synthase beta-subunit (paralog of TrpB) |
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| TIGRFAM ID | [TIGR01415] pyridoxal-phosphate dependent TrpB-like enzyme |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.977746 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGATAGGT GGTACAACAT AGCGGCTGAC TTGCCGGCGC CTTTGGCGCC TCCCAGGGAC
CCGGACGAGG GGGAGAGCAG GATTGCCCTC TTGACGAGGA TTCTCCCATC GGCGCTTATC
GACCAGGAGT TCACCGCAGA GAGGTGGGTC GCCATCCCGG AGGAAGTTAG GGCGGTCTAC
GCCAGGCTGG GAAGGCCCAC TCCCCTCCTC CGTGCCGAGG GTCTGGAGAG GGCCCTTGGG
GTCGAGGTGA GGATTTACTA CAAGTACGAG GGCGTTCTGC CGGTGGGTAG CCATAAGGTC
AACACGGCGG TGGCCCAGGC CTACTACGCC AAGGCTGACG GCGCGGTGGA AGTGGCCACG
GAGACTGGGG CGGGGCAGTG GGGCATGGCG GTCTCGCTAG CCGCGGCCCT CTTTGGCCTC
AGGGCGGTGG TGTTTATGAC TAGGTCTTCT TACAACTCCA AGCGGCAGAG GCTCGCCTTT
ATGAGGGCCT ACGGCGCCAC TGTGTACCCC AGCCCAAGCG ACGTCACTGA GGCGGGGAGG
AGGCACTACA GGCCGGACCA CCCCGGCTCC CTTGGCATAG CCATATCGGA AGCTGTGGAG
TACGTCCTCT CGGGGGAGAG GAGGCGCTAC CTGCCGGGCA GCGTGATGGA GTTCGTCCTC
TTGCACCAGA CGGTGATTGG GCTAGAGGCC GTGAGGCAGT TGCCCGAGGA GCCCGACGTC
GCCGTGGCCT GCGTGGGTGG GGGGTCCAAC TTCGCCGGCT TTACCTACCC AATGATAGGG
GCCAAGCTGA GGGGGGAGGG GTTTGAGAAA ACCCGCTTCA TAGCCGCAGA GTCCGCCGCC
GCCCCCAAGT TGACCAAGGG AGAGTACAGA TACGACTTCC CCGACGCGGT GGGCACCTTG
CCCATGATCA AGATGTACAC CCTGGGCCAC GACTACGTCC CGCCCCCCGT CCACGCCGCG
GGGCTCCGCT ACCACGGAGC GGCGCCGAGC CTATCCCTCC TACGCCGCCT CGGCTACATA
GAGGCAGTGG CCTACCCCCA GGAGGAGGTT ATGCAAGCCG CCCTACTATT CGCCCGAACA
GAGGGCGTAA TCCCAGCCCC CGAGTCGGCC CACGCCATAA AAGCCGCAAT AGACATAGCC
AAGAAGTTGC CCCCAGGCTC CGTCATCGCC ATAAACGTCT CCGGCCACGG CCTCCTAGAC
GTAGACGCCT ACGAAAAATT CCTAGACATA AAACAGCCCT AG
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| Protein sequence | MDRWYNIAAD LPAPLAPPRD PDEGESRIAL LTRILPSALI DQEFTAERWV AIPEEVRAVY
ARLGRPTPLL RAEGLERALG VEVRIYYKYE GVLPVGSHKV NTAVAQAYYA KADGAVEVAT
ETGAGQWGMA VSLAAALFGL RAVVFMTRSS YNSKRQRLAF MRAYGATVYP SPSDVTEAGR
RHYRPDHPGS LGIAISEAVE YVLSGERRRY LPGSVMEFVL LHQTVIGLEA VRQLPEEPDV
AVACVGGGSN FAGFTYPMIG AKLRGEGFEK TRFIAAESAA APKLTKGEYR YDFPDAVGTL
PMIKMYTLGH DYVPPPVHAA GLRYHGAAPS LSLLRRLGYI EAVAYPQEEV MQAALLFART
EGVIPAPESA HAIKAAIDIA KKLPPGSVIA INVSGHGLLD VDAYEKFLDI KQP
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