| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcal_1192 |
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| Symbol | |
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| ID | 4908908 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pyrobaculum calidifontis JCM 11548 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009073 |
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| Strand | + |
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| Start bp | 1107481 |
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| End bp | 1108515 |
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| Gene Length | 1035 bp |
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| Protein Length | 344 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640124946 |
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| Product | HtpX-2 peptidase |
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| Protein accession | YP_001056083 |
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| Protein GI | 126459805 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0501] Zn-dependent protease with chaperone function |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATACCGG TGTTTGACCC AGTGGCCCTC GGCTTATACA TGCTGGGCTA CCTGTTCATG
TTCGTAATAG CCGCCACAGT GGCGCCCAGG GTGGCCGGCG CAGTGTCTGG GCGCCTCACC
TTGTACGGCG CCATGGCGCT CACCGGCGTA ATGATCGTTC TCACAACAGC CTTCGTCATC
TACCTCTTCG TACTAGTGGC GGCGCCGACC TTGGCCACCG TCTCCTTCTT AGTGGGCCTA
ATAGCGTTCG TGGTGCTGAT GAACTTGCTC ACCTACGTCG CCTCGCCGTA TATCATAAAT
GCCTCCTACG GCGCCAGGCC CGACCCCAGG CTTCAGCAGA TAGTGGACGA GGTGGCGGCG
AGGCTCGGCG CCCCATTTAA GCTAAAGGCC GTGGTGGTAG ACGGGCCTCC CAACGCCTTT
GCCTACGGCA ACTTCTTGAC TGGCCGCTAT GTGGCAGTTA CCAGCGGCAT GCTCTCCCTC
GTCGATAGGA GGGAGCTAGA GGCCGTCATT GGCCACGAGA TTGGCCACCA CCTCCACAGA
GACAACGCCA TAATGCTCCT ATTCGGCGTA CTGCCCTCCG TGGTTTACTA CCTCGGCGTC
ACGGCGGTCC ACATGGGTCT CGGCAGCGGT AACAGCAGAG GTGGCAACGC CGCGCTCCTC
GCCGTGGGCG TAGTCGCCGT CTTGGCGTCC TTCCTGATAC AGCTCTTGGT GCTGGCCTTC
AGCCGCCTCC GCGAGTACTA CGCAGACACC GCGGGGGCCA AGGCCGCTGG GAAAGAGGCC
ATGCAGTTCG CCCTGGCGAA GATACACAAG TTCTACTTCA TGGCCCCCGA GGCGAGGCAG
GCGGTGTCGG AGAGCAAATT CCGCGCCCTA TTCATATACG CGCTGGTCAA CGCGGTGGCC
AACCCATTTG TGACCATTAC GAGGGCAGAG GTGGAGCAGA TAAAGAGGGC CAACTACTCA
GCGCTACAGG AGGTGTTCTC AACGCACCCG CCGATACCTA AGCGGCTTAG ATTCCTAGAC
CAGCTACCCC TCTAA
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| Protein sequence | MIPVFDPVAL GLYMLGYLFM FVIAATVAPR VAGAVSGRLT LYGAMALTGV MIVLTTAFVI
YLFVLVAAPT LATVSFLVGL IAFVVLMNLL TYVASPYIIN ASYGARPDPR LQQIVDEVAA
RLGAPFKLKA VVVDGPPNAF AYGNFLTGRY VAVTSGMLSL VDRRELEAVI GHEIGHHLHR
DNAIMLLFGV LPSVVYYLGV TAVHMGLGSG NSRGGNAALL AVGVVAVLAS FLIQLLVLAF
SRLREYYADT AGAKAAGKEA MQFALAKIHK FYFMAPEARQ AVSESKFRAL FIYALVNAVA
NPFVTITRAE VEQIKRANYS ALQEVFSTHP PIPKRLRFLD QLPL
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