| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcal_1181 |
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| Symbol | |
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| ID | 4908885 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pyrobaculum calidifontis JCM 11548 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009073 |
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| Strand | + |
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| Start bp | 1098986 |
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| End bp | 1099510 |
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| Gene Length | 525 bp |
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| Protein Length | 174 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 640124935 |
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| Product | putative RNA-processing protein |
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| Protein accession | YP_001056072 |
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| Protein GI | 126459794 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1094] Predicted RNA-binding protein (contains KH domains) |
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| TIGRFAM ID | [TIGR03665] arCOG04150 universal archaeal KH domain protein |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGCGTCTG AATATCTGCG CGGGGCCATT GTAGAGCCGA TAGAGGCTAA GAGGGCGAGG
GCCGCGCGGG AGTTCGTCAA ACTTGTGGAC GGCAAATACG GCGCCAGGGC GGAGTTCGAC
GAGAGGGAGA TGGTCATCAA AATAACGCCT GGCCAAGGCA CGGGGGTAGA CGCTGTGTTG
AAGCTGAGGG AGATGGCAAG GGCCGTGGCG CTCGGATTTA CTCCACAACA GGCGCTCATG
CTAGAAGACG ACGAGTACGT CTTAGCTGTG GTGGACTTAA AGGAGTACAC AGACAAGCCT
AACCACCTCA GGAGGATAAA AGGCCGCATA ATAGGCGAAG AGGGGAGGGC TAAACACACC
ATTGAGCAAT TGGCCGAGGT GTCAATGGTG GTGGGAGACC ACTACGTGGC GATCCTCGGC
AAGCTAGGCG ACGTAGAGAT AGCGAAAAGA GCAGTGGAGA TGTTAATAGA GGGGAAGAAA
CACAGCACCG TGTATAAGTA TATCCAGGAG GCTAAAAGAG GCTAA
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| Protein sequence | MASEYLRGAI VEPIEAKRAR AAREFVKLVD GKYGARAEFD EREMVIKITP GQGTGVDAVL
KLREMARAVA LGFTPQQALM LEDDEYVLAV VDLKEYTDKP NHLRRIKGRI IGEEGRAKHT
IEQLAEVSMV VGDHYVAILG KLGDVEIAKR AVEMLIEGKK HSTVYKYIQE AKRG
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