Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pcal_1178 |
Symbol | |
ID | 4910034 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pyrobaculum calidifontis JCM 11548 |
Kingdom | Archaea |
Replicon accession | NC_009073 |
Strand | + |
Start bp | 1095853 |
End bp | 1097634 |
Gene Length | 1782 bp |
Protein Length | 593 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640124932 |
Product | thiamine pyrophosphate binding domain-containing protein |
Protein accession | YP_001056069 |
Protein GI | 126459791 |
COG category | [C] Energy production and conversion |
COG ID | [COG4231] Indolepyruvate ferredoxin oxidoreductase, alpha and beta subunits |
TIGRFAM ID | [TIGR03336] indolepyruvate ferredoxin oxidoreductase, alpha subunit |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAAACTCC TACTGTTGGG GAACGAGGCA ATTGCCTACG GGGCGCTCAG CGGAGGCCTA GCCGTAGCCA CGGCATATCC AGGCACGCCC TCTACAGAGG TGTTAGAGAC AATAGAGGAG TTTAAGGACC GCTATACACA CTGGGCGGCC AATGAGAAGA CGGCGTTTGA AATAGCCTAC GGAGCCGCCC TAGCTGGGGC AAGGGCCCTG GTGGCTATGA AGCACGTGGG GCTGAACGTG GCCGCAGACC CCCTCCACAG CGCGGCTTAC ACAGGCGTGG AGGGGGGCCT CCTAGTGGTG TCGGCAGACG ACCCGTGGAT GTACTCTTCT CAGAATGAGC AAGACACCAG GTGGTACGGC GTGCAGGCAT ACGTGCCCGT CCTCGAGCCC TCTAGCCCGG CCGAGGCCTA CGCCTACGCC AAGGCGGGGC TAGAGCTCAG CGAGAGGGTC AAGCAACCCG TCTTGCTTAG GAGCGTGACG AGGGTGAGCC ACGTGAGAGC GCCCGTGGAG GTGGAGCCCC CTGCGCCTCC CAAGTGGGGC AACTTCGTCA GAGATGTGAA GCGCTTCACG CTTGTGCCAG CCCATGCGCG GGAGAGGAGG AGGGAGCTGG TGGAGAAGTG GGAGAAAATG CGGGAGTGGG CCGAGCAGTA CATGACTGTG GAAGACGGCT GCGACAAGGC CGTGGTGGTG ACAGCGGGGG TAGCTTATAC ATATGTAAAA GAGGCGTTGA AGAGGCTGGG CACCTGCGCC ACTGTGGTGA AGCTGGGGAT GTCTGTGCCG CTCCCCCGGA AGATCTCCGA GGTGGTGAAG GGAGAGGCCA TAGTGGTAGA GGAGGGGGAC CCAGTGGTGG AGACTCAGCT CAGGGCACTC GGCGTATCCA CCAGGGGAAA GCTGGACGGC TATTTTCCGC GGTACGGCGA ATTGACCACG GGGAAGGTGG CCGCTGGCAT AGCCAAGGCG CTTGGCCTCC CCTACTCCCC GCCCGCGGTC TACAAGTCGC CCATGGCGCC TCCCCCAAGG CCGCCGTCTC TATGCCCAGG CTGCCCCCAC ATGGCCACCT TCTACGCGCT TAAGGTAGCC ACGGCTGGGC TAAACCCAGT CTGGTCTGGT GACATAGGCT GCTACTCGCT GGGCTTAAAC ACGGGCCAGC AGGACATAAT AACGCACATG GGCTCCTCTG TGGGCCTTGG CCACGGCGTC GCCGTAGCGG CAAAGCGGTT TGTAGTAGCC ACAGTGGGCG ACTCCACCTT CTACCACGCC GTCCTCCCCC AGCTTGTGGA CGTAGCCGCC AAATCTGTCC CCATGTTGAT CGTGGTCATG GACAACGCCT ACACGGCCAT GACGGGCGGC CAGCCGAGCC CAAGCAGATT TCTGCCAGTG GAGAAGATAA CCGAGGCCTT TGGCATACCC ACCTTCGTAG TAGACCCCGT GTATGTCAAG TCGTCTATTG AGACTGTGAA AAAGGCGGTG GAGGTGGTGA AGAGCGGCAG GCCTGCGGTC GTCGTCTCAA GGAGGCCCTG CACTCTCATG GCGGTGAGGA AGGCGCGCCG TAGCGGCGTA AGGCTCCCGA GGTACTTCGT CGACGTGGAC AAGTGCGTCT CTTGTGGAAT TTGCTACAAC GTGTTGAAGT GTAGCGCCAT TTCCAAGGCG TCTGGCGGAA AGGCGTATAT AGACCCCGCT CTCTGCGTCG GATGCGGAGT CTGCGCCGAG GTGTGCCCCG TGGGGGCAAT AAAGGGAGAG GGAGACAGGG CGAAGTGGCT GGAGGTATGG AGACAGGCAT AG
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Protein sequence | MKLLLLGNEA IAYGALSGGL AVATAYPGTP STEVLETIEE FKDRYTHWAA NEKTAFEIAY GAALAGARAL VAMKHVGLNV AADPLHSAAY TGVEGGLLVV SADDPWMYSS QNEQDTRWYG VQAYVPVLEP SSPAEAYAYA KAGLELSERV KQPVLLRSVT RVSHVRAPVE VEPPAPPKWG NFVRDVKRFT LVPAHARERR RELVEKWEKM REWAEQYMTV EDGCDKAVVV TAGVAYTYVK EALKRLGTCA TVVKLGMSVP LPRKISEVVK GEAIVVEEGD PVVETQLRAL GVSTRGKLDG YFPRYGELTT GKVAAGIAKA LGLPYSPPAV YKSPMAPPPR PPSLCPGCPH MATFYALKVA TAGLNPVWSG DIGCYSLGLN TGQQDIITHM GSSVGLGHGV AVAAKRFVVA TVGDSTFYHA VLPQLVDVAA KSVPMLIVVM DNAYTAMTGG QPSPSRFLPV EKITEAFGIP TFVVDPVYVK SSIETVKKAV EVVKSGRPAV VVSRRPCTLM AVRKARRSGV RLPRYFVDVD KCVSCGICYN VLKCSAISKA SGGKAYIDPA LCVGCGVCAE VCPVGAIKGE GDRAKWLEVW RQA
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