Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pcal_1172 |
Symbol | |
ID | 4909293 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pyrobaculum calidifontis JCM 11548 |
Kingdom | Archaea |
Replicon accession | NC_009073 |
Strand | - |
Start bp | 1092437 |
End bp | 1093147 |
Gene Length | 711 bp |
Protein Length | 236 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 640124926 |
Product | hypothetical protein |
Protein accession | YP_001056063 |
Protein GI | 126459785 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2230] Cyclopropane fatty acid synthase and related methyltransferases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTGGGACC TACCTCTTGT AAACTTATAT AGTACAGACA TTGTGGGGTT CATGTACGAC GTGCCCTTCG TGGCGACGCC CGAGGTGGTG GTCAGGAGGA TGCTCCAGCT CGCCCGGGTC CAGCCCGGCG AGATCCTCTA CGACCTGGGG TCTGGGGACG GGAGAATTGT CATAATGGCG GCGAAGGAGT TCGGCGCGCG GGCCTTCGGC GTGGAGATTA GGAAGGACCT CTACGAGCAG TCAATGGCCA GGATCAAGGA CTTGGGCTTG GCCGACAGAG CCACTATAAT AAACGCGAGC TTCTTCGATG TAGATTTGTC AAACGCAGAT GTGGTCACCA TGTACCTCCT CACCAGCGTA AACGAGAGGC TCAAGCCGAA GTTGGAGAGG GAGCTCCGGC CCGCCACGCG GGTGGTCTCC CACGACTTCG AGGTGCCGGG CTGGCGGCCC GTGGTAGTGG AGGAGATATA CGAGGAGTGG AGGAGCCACA AGCTGTTCTT GTACAAGGTG CCGGGGAAGG AGGTGCCCAT GCCCGGCAAA GCCGTGGCCC TGGAGGACAA GTGGCTTAGG CAGGTGGCCG AGCTAGTGGA CGGGTCCAGG TCGCTTGAGG AAATCGCGGC AAAGCTCGGG GTGACGATTA GGCGCGTCAG AGAGGCCGTG GAGGAGTTGA GGAAGCTCGG CGTTGTTGAT GAGGTGAAGA TAATTAAATG A
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Protein sequence | MWDLPLVNLY STDIVGFMYD VPFVATPEVV VRRMLQLARV QPGEILYDLG SGDGRIVIMA AKEFGARAFG VEIRKDLYEQ SMARIKDLGL ADRATIINAS FFDVDLSNAD VVTMYLLTSV NERLKPKLER ELRPATRVVS HDFEVPGWRP VVVEEIYEEW RSHKLFLYKV PGKEVPMPGK AVALEDKWLR QVAELVDGSR SLEEIAAKLG VTIRRVREAV EELRKLGVVD EVKIIK
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