Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pcal_1166 |
Symbol | |
ID | 4908715 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pyrobaculum calidifontis JCM 11548 |
Kingdom | Archaea |
Replicon accession | NC_009073 |
Strand | + |
Start bp | 1088224 |
End bp | 1088946 |
Gene Length | 723 bp |
Protein Length | 240 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640124920 |
Product | SPP-like hydrolase |
Protein accession | YP_001056057 |
Protein GI | 126459779 |
COG category | [R] General function prediction only |
COG ID | [COG0561] Predicted hydrolases of the HAD superfamily |
TIGRFAM ID | [TIGR01484] HAD-superfamily hydrolase, subfamily IIB [TIGR01487] sucrose-phosphate phosphatase-like hydrolase, Archaeal |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTATGTGT TTTTAAACTT TGAGCATCGG CTTGGCGTGG GGTGTAAGGT GCTTGTTGTA GACCTGGATG GGACTCTTAC CCTGAGCCGT AACACCTATG AGTTGTCTGT GGAGGCTCTC TTGGCGCTGA GGAGGGCGCG TGACGCGGGG CTTCGGGTTG TGTTGGCTAC GGCGAACGGC CTGGACTTCG CCCTCACTGT GGCTAGGTAT CTTGGGGTGA GGGACGTCAT TGCAGAAAAC GGCTGCCTTG TCCACGTCGA TGGTGTGACT TATGAGCTGT GTAGTGGGGA CATGTCTGCT GTGGATAGGG CGGTGTTGGC CACGGGGGCT GTTGAGCCGA GTCCTCAGAA CAAGTGTAGG AAGTACGACT TGGCCTATGT GCCCAAGGCG GCAAATGCCG TGGAGCTCGT GAGGGCGGCA GTTGGGCCGG GGTACGTGGT GGAGTCGAGT GGGTACGCCA TCCATGTGAG GCCCGCCGGC GTTGACAAGG GCACCGCGGT GAGGTGGCTC TGCGAGAGGT TTGGGGTGCC TTGCCACCAA GTGGCGGCGG TGGGGGACAG CGACGTGGAT GTGGGCATGT TGGAGGTGGG GTGGGGCATC GCGGTGGGCA ACGCCACGCC GGCCGCCAAG CGCGCGGCGA GGTACGTGGC GGAGGGCCCA AGCGGGCTGG GGTTTAAAGA GGCTGTGGAG TTGATCTTGT CGGGGGAGGC GTGTACGCCC TAG
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Protein sequence | MYVFLNFEHR LGVGCKVLVV DLDGTLTLSR NTYELSVEAL LALRRARDAG LRVVLATANG LDFALTVARY LGVRDVIAEN GCLVHVDGVT YELCSGDMSA VDRAVLATGA VEPSPQNKCR KYDLAYVPKA ANAVELVRAA VGPGYVVESS GYAIHVRPAG VDKGTAVRWL CERFGVPCHQ VAAVGDSDVD VGMLEVGWGI AVGNATPAAK RAARYVAEGP SGLGFKEAVE LILSGEACTP
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