| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcal_1160 |
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| Symbol | |
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| ID | 4908337 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pyrobaculum calidifontis JCM 11548 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009073 |
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| Strand | - |
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| Start bp | 1083471 |
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| End bp | 1084793 |
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| Gene Length | 1323 bp |
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| Protein Length | 440 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640124914 |
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| Product | RNA modification protein |
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| Protein accession | YP_001056051 |
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| Protein GI | 126459773 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0621] 2-methylthioadenine synthetase |
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| TIGRFAM ID | [TIGR00089] RNA modification enzyme, MiaB family
[TIGR01578] MiaB-like tRNA modifying enzyme, archaeal-type |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGCTAAGG CGTACGTCGA GGCCTTTGGC TGCTGGCTTG CGAAGGCTGA CGCAGAGGTA
ATTAGGCAGA GACTCGGCCT CGTCCCTGTG GCAAGGCCGG AGGACGCCGA CGTTATACTT
GTCTACACAT GCGCCGTGAG AGAGGACGGC GAAGTTAGAC AGTTGGCCAG GATAAGGGAG
TTGGCGGGCC TTGGGAGAGA GATGATTGTG GCTGGGTGCC TCGCCCGCTT GAGGCCTCAC
ACTGTGAAGA GCCTTGCGCC ACACGCCGAG TTGATCTACC CCTCGCAGGT GGAGGGCGGG
AGGGAGAGGG AGATGAGAGT CCTCCCACGG TTTGAGGGCG GCCTCGTCTA CGTTGTCCCC
CTTCAAGTGG GCTGTCTGGG GAACTGCACC TTCTGCGCCA CTAAGTACAC GAGGGGCGGC
GCTGGGTATG TCAAAAGCGC AGACCCCGAC GAGGTGATAC GCCACGTGAA AAAGGCCGTG
GAGGGGGGCG CCAGGGAGAT CTACCTCACG GGGCAAGACG TAATTACGTA CGGCTTTGAC
GCAAGGTGGA GGAGTGGGTG GACTCTGCCC GACCTCTTGG AGCGGCTGTT GAGAGAGGTG
GACGGGGAGT ACAGAGTGCG CATTGGCATG TCTGAGCCGT GGGTCTTTGA GCGGTTTGCA
GACCAGATAT TGGACATCGT GAAGCGCGAC CGGCGGGTGT ATCGGTACTT CCACCTCCCC
GTCCAGTCTG GCAGCGACAG AGTGCTCAAG GCCATGGGGA GGCGCTACAC GGTGGACGAG
TACAAGGAGC TTATACGCAA GATTAGGCGC GTCTTGGGCG AGCCGGTCTT CATAGCCACA
GACATAATTG TGGGATTCCC GGGCGAGGAG TGGGAGGACT TCTTGGCCAC GGTGAAGCTG
GTGGAGGAGT TGCAGTTTGA CAAAGTCCAC GTGGCTCGGT TTAGCCCTAG GCCTTTCACA
GAGGCTGCTG TTATGCCGCG CCAAGTGCCG GACGCGGAGA AGAAGCGGCG TAGCAAAATC
CTCTCAGAGG TCGCCCTCAG AGTGGCCCAC CTCAGAAACG GCGCGAGGGT GGGCTCTCGC
GACGTGGTGT TAATAACCGA GGTGGACCAC GGCTTAGTGG TGGGGAGGGC CGGCGACTAT
AGGCAGGTGG TTGTGAAGAG GGGGCCCGGC GACGGGCTCC TGGGCCAGTT CGTCGAAGTG
GTGGTGGCCG GGGCTGGGCC CGTCTACCTA TACGGCGACG TCATAGGAGA GCTTGTTCCC
AGGGGTACTT CTTCGACGCC TTCTCCCTCT TCATTTGCTC AAGAGCTTGC AACATCTTCT
TAA
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| Protein sequence | MAKAYVEAFG CWLAKADAEV IRQRLGLVPV ARPEDADVIL VYTCAVREDG EVRQLARIRE
LAGLGREMIV AGCLARLRPH TVKSLAPHAE LIYPSQVEGG REREMRVLPR FEGGLVYVVP
LQVGCLGNCT FCATKYTRGG AGYVKSADPD EVIRHVKKAV EGGAREIYLT GQDVITYGFD
ARWRSGWTLP DLLERLLREV DGEYRVRIGM SEPWVFERFA DQILDIVKRD RRVYRYFHLP
VQSGSDRVLK AMGRRYTVDE YKELIRKIRR VLGEPVFIAT DIIVGFPGEE WEDFLATVKL
VEELQFDKVH VARFSPRPFT EAAVMPRQVP DAEKKRRSKI LSEVALRVAH LRNGARVGSR
DVVLITEVDH GLVVGRAGDY RQVVVKRGPG DGLLGQFVEV VVAGAGPVYL YGDVIGELVP
RGTSSTPSPS SFAQELATSS
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