Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pcal_1136 |
Symbol | |
ID | 4908853 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pyrobaculum calidifontis JCM 11548 |
Kingdom | Archaea |
Replicon accession | NC_009073 |
Strand | - |
Start bp | 1065818 |
End bp | 1066807 |
Gene Length | 990 bp |
Protein Length | 329 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 640124890 |
Product | hypothetical protein |
Protein accession | YP_001056027 |
Protein GI | 126459749 |
COG category | [S] Function unknown |
COG ID | [COG1817] Uncharacterized protein conserved in archaea |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.345385 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTAAGT TGCTCTTCGA CGCGTTGACC CCCAAGCAGG CGCGTATAGC CGCAGTTCTC CACGTAGAGG GGCGGCGGAG GGGCATAGAG GTGGTGGTGA CGTGTAGAGA GTATATGCAT GTGGAAGACA TGTTGAAGAT GTACAACGTG CCACATCTCT GCGTTGGGAA ATACGGCAAG AACACGTACG AGAAGCTGGT GTTCGGCCTG GAGAGGCAGC TGGGGCTAGT GGAGGTGGCC AAGGGCGTGG ACGGCATGTT GAGCTTCCCC TCGCCTGACG CGGCGAGGGT CGTCTTCGGC CTCGGGAAGC CCCTCGTGGT GTTAAACGAC ACTCCCCACG CAGTGCATGT AAACAGGCTC GTCCTGCCTC TATCCGACGT GCTTATAGCC CCCTCGGCAA TACCCGCAGA GGAGTGGGCT AGGTATTGTC CTCGGCGCGT GGTGACCTTC GACGGGGTGT TTGAGTACAT GTGGATTTCG AGGTTTAGGC CCAACGCCTC TACAGTGGAG AGCCTTGGCC TAGCCCCAGG GCGGTACGTG GTTTTTAGAC CCGAGGAGAG CCACGCGGCG TACTACCGGT GGAATTCTGC GTCGCTCCGC AGGAGGCTTA TGAAGCTCGC CGTCGAAATG GGGTACCAGG TGGTCAACGT GCCGCGGTAC GATGACCAAG TGGAGGAGGG CGTGGTGAAT CTCACACACG CCGTGGACCA CTTAGACTTG GCATACTTCG CCGCGGCGGT GGTCTCTGGG GGCGCGACCA TGGCAACGGA GGCCGCCCTC CTGGGGGTCC CAGCGCTTTC CTACTTCCCA GAGGACTACT ACATTGACCG GTACCTCCAG GAAAGGGGCG CCCCTCTGTT CCGGTGCAAA GACGAGGAGG GTTGCGTAAA GGCGTTGAGA GATGCGCTGA AGAGCGGGAG AGCCACGCCG CCGAGGTTGG AAGACCCGAC GGGCCTCATC TTCGAGGTAG TGAAAGATGT TGTGAGATAA
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Protein sequence | MTKLLFDALT PKQARIAAVL HVEGRRRGIE VVVTCREYMH VEDMLKMYNV PHLCVGKYGK NTYEKLVFGL ERQLGLVEVA KGVDGMLSFP SPDAARVVFG LGKPLVVLND TPHAVHVNRL VLPLSDVLIA PSAIPAEEWA RYCPRRVVTF DGVFEYMWIS RFRPNASTVE SLGLAPGRYV VFRPEESHAA YYRWNSASLR RRLMKLAVEM GYQVVNVPRY DDQVEEGVVN LTHAVDHLDL AYFAAAVVSG GATMATEAAL LGVPALSYFP EDYYIDRYLQ ERGAPLFRCK DEEGCVKALR DALKSGRATP PRLEDPTGLI FEVVKDVVR
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