Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pcal_1134 |
Symbol | |
ID | 4908802 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pyrobaculum calidifontis JCM 11548 |
Kingdom | Archaea |
Replicon accession | NC_009073 |
Strand | + |
Start bp | 1064851 |
End bp | 1065438 |
Gene Length | 588 bp |
Protein Length | 195 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 640124888 |
Product | hypothetical protein |
Protein accession | YP_001056025 |
Protein GI | 126459747 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG1936] Predicted nucleotide kinase (related to CMP and AMP kinases) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.384184 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACATTAG GAGGACAAGG CCCTAGAGTG TTTATAACGG GGACGCCGGG AGTTGGGAAA ACCACGCAGT GTAAAAGGCT AGCCCCCCTC TTGCACACAG AGTGTATATC CCTTGGCGAA GCCCTCCTCT CCTCGCCCTA CGTTAAATAC GTCCCCCACC TCGACACTTA CGAGATAGTG GACATGGAGA AGGCCAAGAG GTATGTGAAG CCTCTACTGT CGAAGGGCAG AGTCTTAGAG ACCCACGTCG TCGAGTTAGT GGATGACGTA GACGTCGTGT TTGTGCTAAG GAAAGCCCCC GACGTGTTAT ACGCCGAGTT GGCCAAGAGG GGGTGGCCCA CGAGGAAGGT CGTGGAGAAC GTGTGGGCAG AGATACTAGA CGTGGTATAC GTGGCCGCCA GAGAGAGGTG GGGCAAGGTG TTTCAGATAG ATGTCACGCG TAGGAGCCCC GAGGAGACCT CTGCCCTCTT GATGAAGTGC CTCTCCGGCG AGTGTGTAGA CGAGGAGGTG GACTGGCTGT CCTACGCCGA GAGGAGCGGG TTTCTCGACT TTATTGAACG TCTGTCTCGC TCGGAGGGCT TGTCTTAA
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Protein sequence | MTLGGQGPRV FITGTPGVGK TTQCKRLAPL LHTECISLGE ALLSSPYVKY VPHLDTYEIV DMEKAKRYVK PLLSKGRVLE THVVELVDDV DVVFVLRKAP DVLYAELAKR GWPTRKVVEN VWAEILDVVY VAARERWGKV FQIDVTRRSP EETSALLMKC LSGECVDEEV DWLSYAERSG FLDFIERLSR SEGLS
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