Gene Pcal_1134 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcal_1134 
Symbol 
ID4908802 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum calidifontis JCM 11548 
KingdomArchaea 
Replicon accessionNC_009073 
Strand
Start bp1064851 
End bp1065438 
Gene Length588 bp 
Protein Length195 aa 
Translation table11 
GC content56% 
IMG OID640124888 
Producthypothetical protein 
Protein accessionYP_001056025 
Protein GI126459747 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG1936] Predicted nucleotide kinase (related to CMP and AMP kinases) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.384184 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACATTAG GAGGACAAGG CCCTAGAGTG TTTATAACGG GGACGCCGGG AGTTGGGAAA 
ACCACGCAGT GTAAAAGGCT AGCCCCCCTC TTGCACACAG AGTGTATATC CCTTGGCGAA
GCCCTCCTCT CCTCGCCCTA CGTTAAATAC GTCCCCCACC TCGACACTTA CGAGATAGTG
GACATGGAGA AGGCCAAGAG GTATGTGAAG CCTCTACTGT CGAAGGGCAG AGTCTTAGAG
ACCCACGTCG TCGAGTTAGT GGATGACGTA GACGTCGTGT TTGTGCTAAG GAAAGCCCCC
GACGTGTTAT ACGCCGAGTT GGCCAAGAGG GGGTGGCCCA CGAGGAAGGT CGTGGAGAAC
GTGTGGGCAG AGATACTAGA CGTGGTATAC GTGGCCGCCA GAGAGAGGTG GGGCAAGGTG
TTTCAGATAG ATGTCACGCG TAGGAGCCCC GAGGAGACCT CTGCCCTCTT GATGAAGTGC
CTCTCCGGCG AGTGTGTAGA CGAGGAGGTG GACTGGCTGT CCTACGCCGA GAGGAGCGGG
TTTCTCGACT TTATTGAACG TCTGTCTCGC TCGGAGGGCT TGTCTTAA
 
Protein sequence
MTLGGQGPRV FITGTPGVGK TTQCKRLAPL LHTECISLGE ALLSSPYVKY VPHLDTYEIV 
DMEKAKRYVK PLLSKGRVLE THVVELVDDV DVVFVLRKAP DVLYAELAKR GWPTRKVVEN
VWAEILDVVY VAARERWGKV FQIDVTRRSP EETSALLMKC LSGECVDEEV DWLSYAERSG
FLDFIERLSR SEGLS