| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcal_1131 |
|---|
| Symbol | |
|---|
| ID | 4910153 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pyrobaculum calidifontis JCM 11548 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009073 |
|---|
| Strand | + |
|---|
| Start bp | 1062521 |
|---|
| End bp | 1063330 |
|---|
| Gene Length | 810 bp |
|---|
| Protein Length | 269 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 640124885 |
|---|
| Product | 6-phosphogluconate dehydrogenase, NAD-binding |
|---|
| Protein accession | YP_001056022 |
|---|
| Protein GI | 126459744 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG2084] 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 0.512184 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGACGTAA CCGTGGTTGG CATGGGCAAC ATGGGATTTG CGTTTGCGAA GAGGGCGCAC
GCCCAGGGGT TCTCTGTCTA CTGGTGGAAT AGGACTAGGG AGAAGGTAAA GGGCGCGCCC
GGCGTTGAGC TAAAGAGGCT TGAGGAGGCG AGGGGTCTCG TGGTTGTGTT TGTGGCAGAC
GACCAAGCCC TCTACTCCGT GGTGGACAAA CTGGGCGGTG AGTACGTGGC TCTGGCTGGC
ACATACTCGG TCGACGCAGT TAGGAGGGCC GTAGGGGCGC TGGCGTCTAG GGGCAAGAGG
GCTTTTGCGA TGCCTGTGGT GGGTAGCCCC AGGAACGTGG AAAACGGCGA CGCTATATAC
CTAGTGGGGG CCTCCGAGGA GGTGTATACG CAGCTGAGGC CCCACCTCGA GAAATTCGGC
GTGTTGTTCT ATGTCGGGGA CAGCGTAAAG GCGGCTGCTC TCAAGTTGGC GTACAACGCG
CTCTTGATAT CCACGGTGGC CGCGCTGGGT GAGTCTCTGT CTCTGGCGCT GAAGTACGGC
ATATCGGCGG ACGCGTTTAG AGAGCTTCTT TCGCACACTG TGTTTAAGGA GGTGGCGGCG
CGCTACGTGG AGAGAATGTT GGGCAAGACG GCCCCAACCT TCACCGTCAG AAACGCGGCT
AAGGACATGC GCTACGCCTC CGCCGCGGCG GGGGAGGCCG GCGTGGGGAA CGTGGCCATA
AGCGGCGTCA AGGCCTTGTA CGAGGTCCTA ACGGCGCTGG GGCTCGGCGA CGAGGACTAC
GTGAAGGCTG GGTTGCTGGA GACGAAATGA
|
|---|
| Protein sequence | MDVTVVGMGN MGFAFAKRAH AQGFSVYWWN RTREKVKGAP GVELKRLEEA RGLVVVFVAD
DQALYSVVDK LGGEYVALAG TYSVDAVRRA VGALASRGKR AFAMPVVGSP RNVENGDAIY
LVGASEEVYT QLRPHLEKFG VLFYVGDSVK AAALKLAYNA LLISTVAALG ESLSLALKYG
ISADAFRELL SHTVFKEVAA RYVERMLGKT APTFTVRNAA KDMRYASAAA GEAGVGNVAI
SGVKALYEVL TALGLGDEDY VKAGLLETK
|
|---|
| |