| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcal_1127 |
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| Symbol | |
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| ID | 4908530 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pyrobaculum calidifontis JCM 11548 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009073 |
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| Strand | - |
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| Start bp | 1058106 |
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| End bp | 1058999 |
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| Gene Length | 894 bp |
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| Protein Length | 297 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640124881 |
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| Product | ribose-phosphate pyrophosphokinase |
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| Protein accession | YP_001056018 |
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| Protein GI | 126459740 |
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| COG category | [E] Amino acid transport and metabolism
[F] Nucleotide transport and metabolism |
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| COG ID | [COG0462] Phosphoribosylpyrophosphate synthetase |
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| TIGRFAM ID | [TIGR01251] ribose-phosphate pyrophosphokinase |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.513591 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGACAAAA TAAATAGCCG TGCTTTGTAT ACGCCTATGC ACATACTTAC GTTCCAGAAC
GCCCTCGACA TAGCCGAGCA TTTTGAGGGG CTGGGGAAAG TTGTGCAGGT GGAGGAGAGG
ACTTTTCCCG ATGGGGAGGT TTTGGTGAGA GTGCCCGAGG CTGGGCCTGT GGTTGTTCTC
GTCGCTAGGC TGTACCCCGG CGTAAATGAC AGCGTGTTTA AGCTCTTCTT GGCCCTCGAC
GCGTTGAACG ACATGGGGGT GGGGAGGGTC GTCGTAGTGG CGCCGTATCT CCCCTACGCG
CGGCAGGATA GGCGGTTTAG GCCGGGGGAG CCCATCAGCG CTAAGGCTCT GTTGAAGACT
TTGGCGAATC TCTCGGTGGG GGCCTTAGTG GCTGTGGACC TCCACAAGCC GTATATTGCC
GACTACGTGC CGCGTGTCGC CGTGAGGAAT GTGTACCCCG CCGAGGAGTT TGCGGAGAGG
CTGAAGGGCG TCGACGCCGT GGTAAGCCCA GACTTCGGCT CGCTTCACAG GGCGGAGGCC
GTCGCCCGCA TCCTCGGCGT GCCTTATACG TACTTTGAGA AGTACCGGGA TAGGGAGACT
GGGGCCATCA CCCTCATGCC CCGTAGGGAC TTGGAGCTGA GGGGGGCCAG GGTGGCCATA
GTCGACGACA TTTTGTCGAC GGGCGGAACT TTAGTGGACG CGTGTAAGGC GGCGAGGACT
CTCGGGGCGT CTGAGGTCTA CGCCGCGGTT ACCCACTGCC AGTTGTTAAA AGACGCGAGG
GAGAAGGCGA AGAGCTGCGT CGATAGGCTG ATTTGTACAG ACAGTATCTT GAACGAGTTT
GCCGAAGTTA AGGTGGGCCC GCTCCTCCGC AGAGAGGTGG AGAAACTGCT ATAG
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| Protein sequence | MDKINSRALY TPMHILTFQN ALDIAEHFEG LGKVVQVEER TFPDGEVLVR VPEAGPVVVL
VARLYPGVND SVFKLFLALD ALNDMGVGRV VVVAPYLPYA RQDRRFRPGE PISAKALLKT
LANLSVGALV AVDLHKPYIA DYVPRVAVRN VYPAEEFAER LKGVDAVVSP DFGSLHRAEA
VARILGVPYT YFEKYRDRET GAITLMPRRD LELRGARVAI VDDILSTGGT LVDACKAART
LGASEVYAAV THCQLLKDAR EKAKSCVDRL ICTDSILNEF AEVKVGPLLR REVEKLL
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