| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcal_1126 |
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| Symbol | |
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| ID | 4909224 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pyrobaculum calidifontis JCM 11548 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009073 |
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| Strand | + |
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| Start bp | 1057101 |
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| End bp | 1058111 |
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| Gene Length | 1011 bp |
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| Protein Length | 336 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 640124880 |
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| Product | histone deacetylase superfamily protein |
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| Protein accession | YP_001056017 |
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| Protein GI | 126459739 |
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| COG category | [B] Chromatin structure and dynamics
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0123] Deacetylases, including yeast histone deacetylase and acetoin utilization protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.546018 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGGTGG TGTTCTCCCC CGTGTTTAAG TTGCACAAAC CGCCGTACAG CCACCCCGAG
GCTCCCGACA GACTCGACGC AGTGTTAAAA GGCGCCGAGG AGGCCGGCGC CGCCGTCCAA
GCGCCAAGGG CCAGAGAGGA CGTGTGGAAC CTCGTGTCGC TGGCCCATGA GAGGGGGTAC
ATAGAGTTTG TGAGAAGGCT GTGTAAAGAG GACTATGCCC AAATCGACGG CGACACGTAC
GTCTCCTCTG GCACATGCGA GGCAGCGGCC TTGGCAGTAA GCGCTATGGC AGACGCCGTG
GACGCAGGCG AGACAGTTTT GCTCGCAGTT AGGCCGCCCG GCCACCATGC GGGGTTTGTG
GGGAGGGCGC TGACGGCCCC AACGCAGGGC TTCTGTATCT TCAATACTGC GGCAATTGGC
GCATTGTACA AGGGGGAGGG CGTCGCTGTG GTAGACATCG ACGTACACCA CGGAAACGGC
ACACAAGAAA TTCTCTACGA CAAGGACCTA CTCTACATCT CTACGCACCA GCACCCAGCC
ACGCTGTACC CAGGCACGGG CTACCCAGAC GAAGTAGGCA CAAGCAAGGG GGAAGGCTTC
AACGTCAATA TACCGCTCCC GCCTCTCACT GGAGACGACG CGTACGCCGA GGCAGTAGAG
GAGGTTATAG AGCCAATCTT GCGGCAGTAC GACCCCAAGA TCATAATCGT GTCCCTGGGA
TGGGACGCAC ACAGAGACGA CCCCTTGGCC AACATGGGGC TGACGATAAA CGGCTACCTA
CGCGCAATTT CCACCATACT CAAACTCCAA AAGCCCACGA TCTTCTTACT CGAGGGAGGC
TACAACAGAG ACGTGTTGAG GAGAGGCACT GCGGCGCTGA TAAGGCTGGT GGACAAGGGC
GAAGAAGCCG CCGGAGAAGC GCCTTCAAAG ACCGACGCCA AGGTATACGA GAGGTTTAGG
AGAGAGCTCG GCGAAGTAAA GAGGCACGTC TCAAAACACT GGCGCCTATA G
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| Protein sequence | MKVVFSPVFK LHKPPYSHPE APDRLDAVLK GAEEAGAAVQ APRAREDVWN LVSLAHERGY
IEFVRRLCKE DYAQIDGDTY VSSGTCEAAA LAVSAMADAV DAGETVLLAV RPPGHHAGFV
GRALTAPTQG FCIFNTAAIG ALYKGEGVAV VDIDVHHGNG TQEILYDKDL LYISTHQHPA
TLYPGTGYPD EVGTSKGEGF NVNIPLPPLT GDDAYAEAVE EVIEPILRQY DPKIIIVSLG
WDAHRDDPLA NMGLTINGYL RAISTILKLQ KPTIFLLEGG YNRDVLRRGT AALIRLVDKG
EEAAGEAPSK TDAKVYERFR RELGEVKRHV SKHWRL
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