Gene Pcal_1124 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcal_1124 
Symbol 
ID4909079 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum calidifontis JCM 11548 
KingdomArchaea 
Replicon accessionNC_009073 
Strand
Start bp1056265 
End bp1056906 
Gene Length642 bp 
Protein Length213 aa 
Translation table11 
GC content60% 
IMG OID640124878 
Productcreatininase 
Protein accessionYP_001056015 
Protein GI126459737 
COG category[R] General function prediction only 
COG ID[COG1402] Uncharacterized protein, putative amidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.838676 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTTTGCC TACTTCCGGT GGGCTCCTAC GAACAACACG GCCCCCACCT GCCCCCCACC 
GTAGACGCCG AGGTCGCCCT GTATGTGGCA AAGAGGCTTG CGGAAGTTAC AAACGGCGTG
GTACTGCCGG CGGTGTACTA CACCTGTAGC GCAGAGCACC AAGGCTTCCC CCGCACAATT
TCGGTCAAGT GCGCGACCTT TATCCAGTAC CTCGAGGATC TGTTGAGGTC TGCCGCCAAC
ACGTGTGAGA GGGTGGTGGT CGTGGTGGGC CATGGAGGAG TGGCGGAGGT CGTCACGCTC
GTGGCACAGC AGCTAAACTA CGAGCTTGGG CCAAGGTTCC TCCCCCTGCC AGTGTGGCGC
TATGTAAAAG TCCGCGACCA CGCGGGCACA GACGAGACCA GCGTGTACTT GGCGATAGGC
GGCGCTGTTG GCAAAATGGA GGAGGTGTGC GAGGGGGATG TGTCCCTATT CGGCGTTATG
AGGGTCTCCG CGTTCTCTAA GACGGGGGTT GTGGGGTGCC TCCGCCCGGC AGAGGTCTCC
GCCGAGCGAG GCAGGGCTTT GCTGGAGGAG GGGATAAGCC AAATGGCTAA AAAAATTGCC
GAATTTATTC GCATTTCTTC ACAGCCTCCA CGAGCTCCCT AA
 
Protein sequence
MLCLLPVGSY EQHGPHLPPT VDAEVALYVA KRLAEVTNGV VLPAVYYTCS AEHQGFPRTI 
SVKCATFIQY LEDLLRSAAN TCERVVVVVG HGGVAEVVTL VAQQLNYELG PRFLPLPVWR
YVKVRDHAGT DETSVYLAIG GAVGKMEEVC EGDVSLFGVM RVSAFSKTGV VGCLRPAEVS
AERGRALLEE GISQMAKKIA EFIRISSQPP RAP