| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcal_1122 |
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| Symbol | |
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| ID | 4909349 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pyrobaculum calidifontis JCM 11548 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009073 |
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| Strand | - |
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| Start bp | 1054863 |
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| End bp | 1055516 |
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| Gene Length | 654 bp |
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| Protein Length | 217 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640124876 |
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| Product | 5-amino-6-(5-phosphoribosylamino)uracil reductase |
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| Protein accession | YP_001056013 |
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| Protein GI | 126459735 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG1985] Pyrimidine reductase, riboflavin biosynthesis |
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| TIGRFAM ID | [TIGR00227] riboflavin-specific deaminase C-terminal domain
[TIGR01508] 2,5-diamino-6-hydroxy-4-(5-phosphoribosylamino)pyrimidine 1'-reductase, archaeal |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.858422 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGACCGT ACGTCTACTT GGCCGCCGCA ACGACGCTGG ACGGGCGAAT TGCCAGCGCC
ACCGGCTACT CACGCCTCTC CTGCCCCATC GACCTAAGGC GCCTCCACGA GCTCAGGGCG
AGGGTAGATG CGGTAATCGT CGGGGCCAAC ACGGCCATTG TAGACAACCC CAGGCTCACA
GTGAGGTACG TGGAGGGTCG AAACCCAATG CGCGTCCTCA TCGACGGCGC GCTTAAGGTG
CCCACCAGCC TCCGCATGTT CGACAACTCG GCCCCAACCC TCGTCTTCAC TACGGCGAAG
GCGCCGGCGG AGAAGATAGT CGAGCTTAGG GCGAGGGGCG TGGAGGTGTA CGTGGCAGAC
GGCGAAAAAG TGGACCCCGC GTGGGTTCTC TCTACGCTTT ACCAGAGGGG CGTGAGGAAG
GTCCTCCTCG AGGGCGGGGG GAGGACAAAC TGGGAGTTTT TACACAGATG TCTCGTGGAC
GAGGTGGTGT TGACAATCAC GCCGTATATA TTCGGCAGAG GAGTGTCCCT AGTAGAGGGG
GAGGGGTACC CCACTAAGGA GGACATGCCC TACTCGCTGG TCCTCCAGTC TGTGAAAACC
TGCGAATGCG GACAGGAGGT AGTGCTGACG TACCGCGTCC AGTGTAAAAA ATAG
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| Protein sequence | MRPYVYLAAA TTLDGRIASA TGYSRLSCPI DLRRLHELRA RVDAVIVGAN TAIVDNPRLT
VRYVEGRNPM RVLIDGALKV PTSLRMFDNS APTLVFTTAK APAEKIVELR ARGVEVYVAD
GEKVDPAWVL STLYQRGVRK VLLEGGGRTN WEFLHRCLVD EVVLTITPYI FGRGVSLVEG
EGYPTKEDMP YSLVLQSVKT CECGQEVVLT YRVQCKK
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