| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcal_1103 |
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| Symbol | |
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| ID | 4908941 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pyrobaculum calidifontis JCM 11548 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009073 |
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| Strand | - |
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| Start bp | 1035855 |
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| End bp | 1036718 |
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| Gene Length | 864 bp |
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| Protein Length | 287 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640124857 |
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| Product | RNAse Z |
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| Protein accession | YP_001055994 |
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| Protein GI | 126459716 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1234] Metal-dependent hydrolases of the beta-lactamase superfamily III |
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| TIGRFAM ID | [TIGR02651] ribonuclease Z |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCCTCTCC TGAAGCTGGT CTTTCTAGGC ACTGGGGGCG CTGTGCCTAA GGCTGATAGG
ATGCTCCCGG CCATATACTT GGAGGACTGG CTAGGGCACA GAGTGCTCCT CGACGCCGGC
GAGGGGGCAC AGTACAGACT GTTACAGGTG GGGGTGTCCC CGGCCTCTCT CACACTGGTG
GCAGTCACCC ACGGCCACGA AGACCACGTC TTGGGCCTGC CCGGCCTCGT GATCACGAGC
CGCTTCCTGG GAGGCAAGGT GCGGGTGCTC GCCCCCCGCT CAATGCACAA GGCGCTGGAG
AGGCTGGGGG TAGAGGTGCT GGAGGGCTAC GCCGCGGAGA GGCTGAAGAT CACTTGTGTT
GAGGTGTGCC ACACAGTGGA CGCGTGCGGG TGGCTCTTTG AGTGGGACGT GGGATACAAG
TTGGACTTGC AGAAGGCTAC GGGGCTCCCC AAGTGGGCTC TCACCAGCCT AATAAAGGGC
CACCCAGTGG AGGTGGAGGG GAGGGTCATT AGGCCGGAGG ACGTGGCCGA CCCGGCCCAC
AGGCGGTTTA AGAGGCTGTT GTACACCGGC GACACGGGGC CCTGCCCCCG CATGTGGGAG
ACAGTGGGCG AAGTCGACGT GTTGATCCAC GAGGCCACTT TTGCCGACGA CGTTGAGTCC
CAGAAGGCGC ACGAGGAGGG GCACTCCACT TTCGCAGACG CCCTAGAGGC GGCGAGGGCC
CTCAGGGCAA AGGTCCTCAT TTTGACGCAC ATAAGCGCGC GGTACCCCGA CAAGAGCCGC
CACAGGCAAC TGGCCGCACA AGTGACGCCC CCACCCCACG TCTATGTGCC CGACGACTTT
GATACTTTGC TCGTACAACT TTGA
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| Protein sequence | MPLLKLVFLG TGGAVPKADR MLPAIYLEDW LGHRVLLDAG EGAQYRLLQV GVSPASLTLV
AVTHGHEDHV LGLPGLVITS RFLGGKVRVL APRSMHKALE RLGVEVLEGY AAERLKITCV
EVCHTVDACG WLFEWDVGYK LDLQKATGLP KWALTSLIKG HPVEVEGRVI RPEDVADPAH
RRFKRLLYTG DTGPCPRMWE TVGEVDVLIH EATFADDVES QKAHEEGHST FADALEAARA
LRAKVLILTH ISARYPDKSR HRQLAAQVTP PPHVYVPDDF DTLLVQL
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