Gene Pcal_1102 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcal_1102 
Symbol 
ID4909262 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum calidifontis JCM 11548 
KingdomArchaea 
Replicon accessionNC_009073 
Strand
Start bp1035092 
End bp1035841 
Gene Length750 bp 
Protein Length249 aa 
Translation table11 
GC content61% 
IMG OID640124856 
Productmethyltransferase type 11 
Protein accessionYP_001055993 
Protein GI126459715 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCTCAAGG CAGTAGCGGC GTACTACGAC GCCGCCGCCA AGAGGTACGG CGACAAGTAT 
CTCAAAATGG AGTACTACAG GACCTTGTAC AGGAAGGTGG GCGAGGTCCT AGACAAATAC
GTCAAGCCGG GGATGTCCAT CCTAGACGTG GGGGCTGGGA CTGGGTTCTG GACCACCTAC
ATGGCCGCCA AGGGGGCCCA CGTAATTGCT CTGGACATAT CCGCCAAGTC GCTCCGCGAG
TGCAAATGCG GCGACCGGGT GGCCGCCGAT GGCGAGTCGT TGCCGGCGAG GAGAAGCCGC
TTTGACGCAG TGACGGCGCT GGGAAGCGTG CTCAACCACA TGCCAGACGC CGCGCGCGCC
GTGAGAGAGG CATCGCGGGC CCTCAGGCCG GGTGGCGTCC TAATAGCCGA CGTAGACAAC
GCCCTCTGCC TAGACATGTT GTACGAATAC GCCCTCTTCC AAGGCCTTGG AAAACTCGTC
GAAGCCCTCA AGCGCGGAGC GGTGAGAGGC GTATGGGAAT CCGCAGACGG CGAAATACCC
TTCACCTACT ACACCTACTA CTACGTAAAA AAGGTCCTAC ACAGCGCCGG GCTCAAGCTG
GTCGAAGCGC GCCCCATCTA CCTCCTCCCC CTGCTCCCCA GCCGCGTGCT ACAGCGCGAC
TTCAAGACAA AGCCCCTGGA GAAGCTAGAC CTACTAAAGC CCCTCGCCCC CCTAGCCACC
ACCGTGATAT ACGTGGCCAA GAAGCCCTAG
 
Protein sequence
MLKAVAAYYD AAAKRYGDKY LKMEYYRTLY RKVGEVLDKY VKPGMSILDV GAGTGFWTTY 
MAAKGAHVIA LDISAKSLRE CKCGDRVAAD GESLPARRSR FDAVTALGSV LNHMPDAARA
VREASRALRP GGVLIADVDN ALCLDMLYEY ALFQGLGKLV EALKRGAVRG VWESADGEIP
FTYYTYYYVK KVLHSAGLKL VEARPIYLLP LLPSRVLQRD FKTKPLEKLD LLKPLAPLAT
TVIYVAKKP