Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pcal_1098 |
Symbol | |
ID | 4909959 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pyrobaculum calidifontis JCM 11548 |
Kingdom | Archaea |
Replicon accession | NC_009073 |
Strand | + |
Start bp | 1031267 |
End bp | 1031872 |
Gene Length | 606 bp |
Protein Length | 201 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 640124852 |
Product | isochorismatase hydrolase |
Protein accession | YP_001055989 |
Protein GI | 126459711 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG1335] Amidases related to nicotinamidase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTTCCGG CCACTGTCTC TGTGCCAAGG GTGACGGTGG TGGACAAGGT GGTCCTCCCG GCGGATAAGA CCGCGGTGGT TGTAGTAGAT ATGCAGAACG ACTTTGCCCA CCCCAACGGA AGGCTGTATT CCCCCTCCTC GCGGGAGATT ATCCCGAGGA TAGCCAAGCT CTTGGCCAAG GCCAGGGAGA AGAAGGTGAG GGTCATATAC ACCCAGGACA CTCACTATCC CGACGACCCG GTGGAGTTTC CCATATGGGG GCCGCATGTG GTTAAGGGTA GCTGGGGATG GCAGATAGTG GACGAGCTCA AGCCGGCCGA GGGCGACATC GTGGTCGAGA AGATGCGCTA CGATGCCTTC TTTGGCACGC CGCTTGATCA CATACTCCGT ATGTACGGCG TGAGACACCT AGTGGTGACG GGCACCGTGG CCAACATATG CGTCCTCCAC ACGGTGGCCA GCGCCAGGCT TAGGCTCTAC GACGTGGTTG TCCCCATAGA CGCAATAGCG GCACTCAACG AGTTCGACTA CGCCGCCGCG CTGCGGCAGA TGGACTTCCT CTACAAAGTC ACGTTGACTA CGACGGAGGG GGTGGAGTTC CAGTGA
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Protein sequence | MLPATVSVPR VTVVDKVVLP ADKTAVVVVD MQNDFAHPNG RLYSPSSREI IPRIAKLLAK AREKKVRVIY TQDTHYPDDP VEFPIWGPHV VKGSWGWQIV DELKPAEGDI VVEKMRYDAF FGTPLDHILR MYGVRHLVVT GTVANICVLH TVASARLRLY DVVVPIDAIA ALNEFDYAAA LRQMDFLYKV TLTTTEGVEF Q
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