Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pcal_1096 |
Symbol | |
ID | 4910174 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pyrobaculum calidifontis JCM 11548 |
Kingdom | Archaea |
Replicon accession | NC_009073 |
Strand | - |
Start bp | 1029840 |
End bp | 1030220 |
Gene Length | 381 bp |
Protein Length | 126 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 640124850 |
Product | endoribonuclease L-PSP |
Protein accession | YP_001055987 |
Protein GI | 126459709 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0251] Putative translation initiation inhibitor, yjgF family |
TIGRFAM ID | [TIGR00004] endoribonuclease L-PSP, putative |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGGAGG TTATATACAC TGAGGCGGCT CCAAAGCCCA TCGGCCCCTA CTCCCAGGCG GTGAGAGTGG GGAACCTACT CTTCGTGGCT GGGCAAATAC CGGTGGACCC CAAGACAGGG GAGGTGGTGG GGAGGGACAT AAGGGAGCAG ACAAGGCAAG TGTTAGAGAA CATAAAGGCC GTGCTAGAGG CGGCGGGGTA CACCCTCGAC GACGTGGCAA TGGCCTTCGT ATTTCTAGCC GACATGGGGC ACTTCCCAGC CTTCAACGAG GTCTACGCCC AGTACTTCAA GGAGAAGCCG CCAGCCAGAG TCACTGTGCA GGCGGCGAGA CTGCCGCGAG ACGTCCTCGT AGAGATAGCG GTAATAGCGG CGAGGGGATG A
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Protein sequence | MKEVIYTEAA PKPIGPYSQA VRVGNLLFVA GQIPVDPKTG EVVGRDIREQ TRQVLENIKA VLEAAGYTLD DVAMAFVFLA DMGHFPAFNE VYAQYFKEKP PARVTVQAAR LPRDVLVEIA VIAARG
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