Gene Pcal_1089 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcal_1089 
Symbol 
ID4910024 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum calidifontis JCM 11548 
KingdomArchaea 
Replicon accessionNC_009073 
Strand- 
Start bp1023582 
End bp1024073 
Gene Length492 bp 
Protein Length163 aa 
Translation table11 
GC content61% 
IMG OID640124841 
ProductCDP-alcohol phosphatidyltransferase 
Protein accessionYP_001055980 
Protein GI126459702 
COG category[I] Lipid transport and metabolism 
COG ID[COG0558] Phosphatidylglycerophosphate synthase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCGTGG ACCCCAACGT CTTAACTCTA CTATCGGCCG TCGTAGCGTG GCTGGGAGTC 
CCCCTTGTCC TTCTCCACGG TGTCCCGCCT TGGCTTTTCA TCGCCGTGTC TGGGGTCTTA 
GACGCAGTGG ATGGGGCTGT GGCTAGGGCG CGGGGGCTTG CATCTAGGAG GGGGGCCTTC 
CTAGACTCGT TCGCAGACAG ATATACCGAC GCGGCTTACC TCTTGTACTT CTGGCGCCAA 
GCGGATCCGC TGATTCTGCT CGTAGCCATG GTGGGCACCT TCACCATAAG CTACGCGAGG 
TGTAGAGGCG AGGCTCTTGG GGCCGAGGTG AGGGGGGTTG GGTTCATGGA GAGGGGGGAG 
AGGGTGGCGT ACCTCTTCGT CGCCAGCTTT TTCGGCGGAG ACCTCTTGCC TTGGCTCCTG 
GCGGCGTATG CGGTATTGGT AAACGCCGCG GCGCTGTACC GGGGGTTCGC CGTGTTTAAA 
AAGCTTAAAT AG
 
Protein sequence
MPVDPNVLTL LSAVVAWLGV PLVLLHGVPP WLFIAVSGVL DAVDGAVARA RGLASRRGAF 
LDSFADRYTD AAYLLYFWRQ ADPLILLVAM VGTFTISYAR CRGEALGAEV RGVGFMERGE 
RVAYLFVASF FGGDLLPWLL AAYAVLVNAA ALYRGFAVFK KLK