Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pcal_1087 |
Symbol | |
ID | 4910091 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pyrobaculum calidifontis JCM 11548 |
Kingdom | Archaea |
Replicon accession | NC_009073 |
Strand | + |
Start bp | 1020590 |
End bp | 1023151 |
Gene Length | 2562 bp |
Protein Length | 853 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 640124839 |
Product | DNA polymerase I |
Protein accession | YP_001055978 |
Protein GI | 126459700 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0417] DNA polymerase elongation subunit (family B) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGAGAACG AGTTTGAGTT TGAAGAATTT GAAGAAGAAG TACAGGAGTA CGAGGGGGAG GCCATCGAGG AGAGTAAGCT AAAGGGCGTT GTCTCAGTCA CGATCCCCCC CTCGCTGGTT CTCGCCGTGG TCTACGACGG GGCCGAGGGA AAGGCCTTGG TGAAGTTCTA CGACCCCGTC GGCGACGTGG TTTACTACTG GTACGACAAC ACTGGCCATA GGCCGTACCT AATCGTAAAG ATGTCGCCGG AGGAGCTTGT GGAGAAGTTT CCAGACTTGT TAAAACACCC TGGCTTTAGC CACATAGACG TAGAGGAGAA ATACGACGCG TTGCACGACG AGAGGATTGT TGTGACAAAG GTCTACGCGA AGGACCCCCT CACTGTGGGA GGGGGGAAGA AGTCCTTTAG GGATATGCTT GGCGCCACTT GGGAGTCGCG GATAAAGTAC CACCACAGCT ACCTCTTCGA CCGGGGCATA ATCCCCGGCA TGTGGTATAG GTCCAACGGC TCTGGCCTTG TCCCAGTGGA GATATTCATA CCCCCCGAGG TTAAGTCCTC TCTGGGCAAG GTGTTTAAGC AGGAGCACGC CAAGGTGGCC GAGGAGTGGA TGCCCCTCTT CCAGGCGCCA ATACCCCACC TGAGGAGGGT GGCAATAGAC GTGGAGGTCT ACACGCCGCA GGAGAACAAG ATCCCTGACC CAAAGGAGGC CCTCTACGAG GTAATCTCCG TGGCCGTGGT GGGTAGCGAT GGGCTCAAGC GCGTCTTTGT CTTGAAGAGG CCCGGCGCCG AGGCGGACCT CAGGTATAGG CCGGACTACG AGGTGTTTTT CTTTGACAGC GAGTACGACC TAATTAGAGA GGTCTTGAAG GTCATTGTCC AGTACCCCGT GGTGATAACC TTCAACGGGG ACAACTTCGA CCTCCCATAT CTCTACAACC GCGCCTTGGC CCTCGGCATA CCCAAGGAGG AGTTGCCGAT AGCGGCTAAG CGGGACTACG TAAGCGTGGT CCCCGGAATA CACATAGACC TCTTCAAATT TTTCGCCATC AAGGCGGTTG AGGCCTACGC CTTCGGCGGA GTATATAGGG GGGAGAGGGG GCTCGACGGC ATCGCCTACG CCATCTTGGG CGTGGGGAAG GTGGAGAGAC AGAAGAACGT ATCTAAGATG GGCTACTGGG AGCTCGCCGA GTACAACTAC AGAGACGCCC TAATTACCCT CTACTTCACT CTCTACAATA ACGAGCTGGT GATGAAGCTA ATACTCTTGA TGTCTAGAAT TGCGAAGATG CCCATTGAGG ACATCACTAG GTCGCAGGTG TCGGCCTGGA TCCGCAACAT GTTGTACTAC GAGCACAGGA GGAGGGGCTG GCTTATACCA AACAAGGAGG ACATACTAGC GGAGAAGGGC CAAGTCTACA CCAAGGCCAT TATCAAGGGG AAGAAGTACG CCGGCGCCGT GGTGCTGGAC CCGCCTCTCG GCGTGTTTTT CAACGTGTAT GTGCTAGACT TCGCCTCTCT GTACCCCTCC ATAATCAGCA AGTGGAACCT CTCCTACGAG ACTGTCAACT GCAAGGGCGG TGGGGAGAGG CCAATCCCGG AGCTCCCCCA CACCGTGTGC CGCGATAGGC CGGGCATGAC CAGCACCCTG GTCGGCGTCC TTAGAGACTT GAGAGTCCAC GTGTACAAGA AGTTGGCCAA GTCGGCGCCC ACGCCCGCGG AGAGGCAGCT GTACGACGTC GTCCAAAGCG CCATGAAGGT CTTCATAAAC GCGTCCTACG GCGTCTTCGG GGCGGAGAAC TTCCCGCTGT ACTGCCCGCC GGTCGCCGAG TTGACCACTG CCCTCGCCAG GTACGTCATG ACGAGCACTG TGCTAAAGGC CACGCAGCTG GGGCTAATCC CCCTGTACGG AGACACGGAC TCCCTCTTCC TATGGGACGT CTCCGAGGAC AAGCTAAAGA AGTTGATTGA GTACACAGAG GAGTTGGGCA TAGACATCGA GTTGGACAAG GTGTACAGGT TCGTCATGTT CAGCGGCAGG AAGAAGAACT ACCTAGGCGT AACCGCGGAC GGAGGCGTCG TAGTAAAGGG CATTGTGGCC AAGAAGCGCA ACGCCCCGCC GCTGGTGAAA GAGCTCGTGG AAGAGATAAT CGACCGGCTT AAGAACGTGG CGACGGTGGA CGACATGCTC AAAATCAGGG AGGAGGTAAT AGCCATGGTG AAGGAGACCG AGGCCAAGAT TAGGGAGAAA AAAATTACGC TAGAAAAGCT GGGGATAAAG ATCGTGCTCA ACAAAAACCT CAACGAGTAC ACCAAAAACA AGCCGCAGCA TGTGAAGGCG GCAGAGCAGT TGCTGAAGTA CGGGATTCAG GTGGGGCGCG GCGACGCCAT CGTGCTCATA AAGACGAAAG ACGCCATGGG CGTAAAGCCG ATACAGCTGG CGCGCATAGA CGAAATAGAC GAGAAGAAGT ACCTAGAGTA CATTAGCACG TCCCTAGAAC AAGTGCTAGA GGCGATGGGA GTCTCGATGG AAGAGCTGAG AGGGGCAATG CGCCTATTCT AG
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Protein sequence | MENEFEFEEF EEEVQEYEGE AIEESKLKGV VSVTIPPSLV LAVVYDGAEG KALVKFYDPV GDVVYYWYDN TGHRPYLIVK MSPEELVEKF PDLLKHPGFS HIDVEEKYDA LHDERIVVTK VYAKDPLTVG GGKKSFRDML GATWESRIKY HHSYLFDRGI IPGMWYRSNG SGLVPVEIFI PPEVKSSLGK VFKQEHAKVA EEWMPLFQAP IPHLRRVAID VEVYTPQENK IPDPKEALYE VISVAVVGSD GLKRVFVLKR PGAEADLRYR PDYEVFFFDS EYDLIREVLK VIVQYPVVIT FNGDNFDLPY LYNRALALGI PKEELPIAAK RDYVSVVPGI HIDLFKFFAI KAVEAYAFGG VYRGERGLDG IAYAILGVGK VERQKNVSKM GYWELAEYNY RDALITLYFT LYNNELVMKL ILLMSRIAKM PIEDITRSQV SAWIRNMLYY EHRRRGWLIP NKEDILAEKG QVYTKAIIKG KKYAGAVVLD PPLGVFFNVY VLDFASLYPS IISKWNLSYE TVNCKGGGER PIPELPHTVC RDRPGMTSTL VGVLRDLRVH VYKKLAKSAP TPAERQLYDV VQSAMKVFIN ASYGVFGAEN FPLYCPPVAE LTTALARYVM TSTVLKATQL GLIPLYGDTD SLFLWDVSED KLKKLIEYTE ELGIDIELDK VYRFVMFSGR KKNYLGVTAD GGVVVKGIVA KKRNAPPLVK ELVEEIIDRL KNVATVDDML KIREEVIAMV KETEAKIREK KITLEKLGIK IVLNKNLNEY TKNKPQHVKA AEQLLKYGIQ VGRGDAIVLI KTKDAMGVKP IQLARIDEID EKKYLEYIST SLEQVLEAMG VSMEELRGAM RLF
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