Gene Pcal_1084 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcal_1084 
Symbol 
ID4909997 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum calidifontis JCM 11548 
KingdomArchaea 
Replicon accessionNC_009073 
Strand
Start bp1017760 
End bp1018866 
Gene Length1107 bp 
Protein Length368 aa 
Translation table11 
GC content60% 
IMG OID640124836 
Productacetyl-CoA C-acyltransferase 
Protein accessionYP_001055975 
Protein GI126459697 
COG category[I] Lipid transport and metabolism 
COG ID[COG0183] Acetyl-CoA acetyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGACG TATACGTTGT AGGCGCAGCC CTTCACCCAG TGGGCCGCCA CTATTCTAAA 
AACATCGACG ACATGGCCGC CGCAGTGTTA GACAAGGCCA TTGCAGACGC GAAGGCCGAC
ATAGAGGCCC TATACGTGGC CTCCTCCACC ACCGAGTTGG CAAATAAGCA ACAGCTACTC
GGCGTCTACA TCCTAGAGGC GCTGGGGCTG GACGGAATCC CAGTGTACAG AGTGGAAAAC
GGCGACGGGT CTGGAGGCTC CGCAGTGGCG GCGGCATACC ACGCGCTGAG GGCCGAGGAG
TACAACTGCG TTGCAGTAGT CGGCGTCGAC AAGCCCAACG ACGTCTTAAG CAACCAGCAA
CAGGACATAT ACGCCACCAC GTTGGACACG TACTTTGAGA GATACTTCGG CTTCACGCCC
CTCTCCCAGG CGGCCCTCAT GGCCAAGATG TACCTAAGGA AGTACGAGTA CAAGTACGAG
GACTTGGCCC AGTGGGCCGT GCTCATGCAC AACCGCGGCG CGGCGAACCC CTACGCCTAC
TTTAGAAAAC CCATAAAGCT AGAAGACGCC GTCAACAGCG AGTACGTCAG CGAGCCCCTC
CGGCTATACG ACGTCGGGCC GCTCGCAGAC GGCGCCGCCG CGGCCGTGCT GTGCAACAAC
AGGCGAGACG GAGTGCGCAT ACTCCACGTG GCCACGGCCA CCAACCCCAC GCCCTTTAAC
CTACGCCAAG ACTACGACAG GCTGGTCAGC CTGGAGAAGG CGGCTGAGCA GGCATACTCC
AAGGCAAAGA TAACCCCCAG AGACGTGGCA ACGGCCGAGG TGCACGACTC GTTCTCCATC
TTCGGCATCT TGGCACTTGA GGCCCTTGGA CTAGCTAGGC GGGGCACAGC CCCCCTCATC
ATAAAAGAGG GCAACGCCCC CGTGAACTAC AGCGGCGGGT TTAAGGCAAG GGGGAACATA
CTGGGGGCCA CCGGTGTGTA CCAACTGGTA GAGGTGGCTT GGCAACTGCA GGGGAGAGAG
TTCAAGCGCG TAGACGGGAG CTACGGCCTC GTCCACTCCA TGGGCGGCGT GGACAAAATT
TCGACTATTG TCCTAATGGG ACTGTAG
 
Protein sequence
MKDVYVVGAA LHPVGRHYSK NIDDMAAAVL DKAIADAKAD IEALYVASST TELANKQQLL 
GVYILEALGL DGIPVYRVEN GDGSGGSAVA AAYHALRAEE YNCVAVVGVD KPNDVLSNQQ
QDIYATTLDT YFERYFGFTP LSQAALMAKM YLRKYEYKYE DLAQWAVLMH NRGAANPYAY
FRKPIKLEDA VNSEYVSEPL RLYDVGPLAD GAAAAVLCNN RRDGVRILHV ATATNPTPFN
LRQDYDRLVS LEKAAEQAYS KAKITPRDVA TAEVHDSFSI FGILALEALG LARRGTAPLI
IKEGNAPVNY SGGFKARGNI LGATGVYQLV EVAWQLQGRE FKRVDGSYGL VHSMGGVDKI
STIVLMGL