Gene Pcal_1072 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcal_1072 
Symbol 
ID4909727 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum calidifontis JCM 11548 
KingdomArchaea 
Replicon accessionNC_009073 
Strand
Start bp1010458 
End bp1011027 
Gene Length570 bp 
Protein Length189 aa 
Translation table11 
GC content58% 
IMG OID640124824 
Productclass II aldolase/adducin family protein 
Protein accessionYP_001055963 
Protein GI126459685 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0235] Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGGAGG AGTTTCTACG GTACGTAAGG CTGTTGTACG AGAGGGGGCA CATAACGCTT 
TTGTCTGGCA ACGTCTCGGC CAAGAGCGGG GACTTAATCC TCATTACGCC GACGAATTGG
CCGAAGCCCT TCTTGACGCC CGAGGACTTG GTGTGGATAA ACCTCTCCGG CGAAGTGGTG
AAGGGTAGGC TGAGGCCGAC TAGCGAGTGG AGGCTCCACG TGGAGGTGTA CAAGAGGCGG
CAGGACGTGG GGGCTGTGGT TCATACGCAC GACGTGTTGC CCACTGTGTT GGCCGAGAGG
ATAGACGCCT CTGCCTTGTC GGAGGCCGAG GCCTATCTGG GCTCTGGCGT GGCTGTTGTG
CCGTATATAA AGCCGGGCAC GAGGGAGCTC GCGGAGGCGG CGGCCGAGGC GCTTATCCAC
AGCAACGTGG CTGTGTTGAA GAGACACGGC GTGGTGGCCG TGGGGAGAGA CTTGGCCGAG
GCTGTGAATA GGGTAGAGGT GTTGGCAGAC TTAGCTAAGG CGACGTTGTA CACGACTATT
TTAAAAATAG TGGAGAAGTA TGCGCTGTGA
 
Protein sequence
MEEEFLRYVR LLYERGHITL LSGNVSAKSG DLILITPTNW PKPFLTPEDL VWINLSGEVV 
KGRLRPTSEW RLHVEVYKRR QDVGAVVHTH DVLPTVLAER IDASALSEAE AYLGSGVAVV
PYIKPGTREL AEAAAEALIH SNVAVLKRHG VVAVGRDLAE AVNRVEVLAD LAKATLYTTI
LKIVEKYAL