Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pcal_1072 |
Symbol | |
ID | 4909727 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pyrobaculum calidifontis JCM 11548 |
Kingdom | Archaea |
Replicon accession | NC_009073 |
Strand | - |
Start bp | 1010458 |
End bp | 1011027 |
Gene Length | 570 bp |
Protein Length | 189 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 640124824 |
Product | class II aldolase/adducin family protein |
Protein accession | YP_001055963 |
Protein GI | 126459685 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0235] Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAGGAGG AGTTTCTACG GTACGTAAGG CTGTTGTACG AGAGGGGGCA CATAACGCTT TTGTCTGGCA ACGTCTCGGC CAAGAGCGGG GACTTAATCC TCATTACGCC GACGAATTGG CCGAAGCCCT TCTTGACGCC CGAGGACTTG GTGTGGATAA ACCTCTCCGG CGAAGTGGTG AAGGGTAGGC TGAGGCCGAC TAGCGAGTGG AGGCTCCACG TGGAGGTGTA CAAGAGGCGG CAGGACGTGG GGGCTGTGGT TCATACGCAC GACGTGTTGC CCACTGTGTT GGCCGAGAGG ATAGACGCCT CTGCCTTGTC GGAGGCCGAG GCCTATCTGG GCTCTGGCGT GGCTGTTGTG CCGTATATAA AGCCGGGCAC GAGGGAGCTC GCGGAGGCGG CGGCCGAGGC GCTTATCCAC AGCAACGTGG CTGTGTTGAA GAGACACGGC GTGGTGGCCG TGGGGAGAGA CTTGGCCGAG GCTGTGAATA GGGTAGAGGT GTTGGCAGAC TTAGCTAAGG CGACGTTGTA CACGACTATT TTAAAAATAG TGGAGAAGTA TGCGCTGTGA
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Protein sequence | MEEEFLRYVR LLYERGHITL LSGNVSAKSG DLILITPTNW PKPFLTPEDL VWINLSGEVV KGRLRPTSEW RLHVEVYKRR QDVGAVVHTH DVLPTVLAER IDASALSEAE AYLGSGVAVV PYIKPGTREL AEAAAEALIH SNVAVLKRHG VVAVGRDLAE AVNRVEVLAD LAKATLYTTI LKIVEKYAL
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