Gene Pcal_1071 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcal_1071 
Symbol 
ID4909736 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum calidifontis JCM 11548 
KingdomArchaea 
Replicon accessionNC_009073 
Strand- 
Start bp1009823 
End bp1010461 
Gene Length639 bp 
Protein Length212 aa 
Translation table11 
GC content57% 
IMG OID640124823 
Producthypothetical protein 
Protein accessionYP_001055962 
Protein GI126459684 
COG category[H] Coenzyme transport and metabolism
[K] Transcription 
COG ID[COG1339] Transcriptional regulator of a riboflavin/FAD biosynthetic operon 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACAGAGC TCTACTGTGA GAGAAAGACG CTGGCCGACC TCATAGCTTT TGCCTCTGTA 
GAGGGCTTGC CTGTGGGAGA GGCGGCAAAG AGGCTCTGTA TGTCTAGGCA GGGCGCGTAT 
AAGGCCGTGA AAGCGCTAAG GGAAGCCGGC TATTTGTCTG AGGGGCCTGT CATAAAGCTT 
ACTCAGAAGG GCCGCGACGC GTTAAGCATA GTCTTGCGCA ACCTTCTCCG CTACTTTGAC 
ATAGCTTCTA TTAAGCTCGT GGGAAGAGTG GTGACGGGGC TCGGCGAGGG GGCTTTCTAC 
ATGTCGCTGG AGGGCTACAG AAGGGCGATT GAGAGAGAGC TGGGCTTTAC CCCATACCCC 
GGCACTTTGA ACATAAAGCT GGAGCCCCAG TCTCTGGCAC ATAGGAGGTA CCTCGACGGC 
CTCCCCGGCA TTCACATACC GGGGTTTACA AACGGTATGA GGACGTACGG CGCTGTGAAG 
GCGTTTAGGG CTAGGCTGGC AGACGTGGAG GGCGCAGTGG TGATGCCAGA GCGTACTCAC 
CACCCCGTCG ACGTGATTGA GTTCATTGCG CCTGTCCGCG TCCGAGACGT GCTAGGGTTG 
AAAGATGGCG ACCGAGTGGA GCTGGAGGTG TACCTATGA
 
Protein sequence
MTELYCERKT LADLIAFASV EGLPVGEAAK RLCMSRQGAY KAVKALREAG YLSEGPVIKL 
TQKGRDALSI VLRNLLRYFD IASIKLVGRV VTGLGEGAFY MSLEGYRRAI ERELGFTPYP 
GTLNIKLEPQ SLAHRRYLDG LPGIHIPGFT NGMRTYGAVK AFRARLADVE GAVVMPERTH 
HPVDVIEFIA PVRVRDVLGL KDGDRVELEV YL