| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcal_1059 |
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| Symbol | |
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| ID | 4908125 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pyrobaculum calidifontis JCM 11548 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009073 |
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| Strand | - |
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| Start bp | 999996 |
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| End bp | 1000631 |
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| Gene Length | 636 bp |
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| Protein Length | 211 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 640124811 |
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| Product | fumarase beta subunit |
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| Protein accession | YP_001055950 |
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| Protein GI | 126459672 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1838] Tartrate dehydratase beta subunit/Fumarate hydratase class I, C-terminal domain |
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| TIGRFAM ID | [TIGR00723] hydro-lyases, Fe-S type, tartrate/fumarate subfamily, beta region |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.162122 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCTTTTAA TACCGTGCGT AGTTTGTGCT ATGGCTGTGT ATCGGTTGAA GACTCCTCTT
TCGGACAGCG ACGTGTCTAG GCTTAGGGTT GGGGACACTG TCTACATCTC CGGCGTAGTG
GTGAGCGCGA GGGATTCTGC CCATAAGCGG ATGGTGGAGC TTTTGCAAAA GGGGGAGCCC
TTGCCTGTTG ATCTACGCGG AGGCGTTATT TACCACGCGG GGCCCGTAGC CCAGCGGGTG
GACGGCGGGT GGCGCATCAT CAGCATGGGG CCCACCACCA GCGCCAGGAT GGAGGCGTTT
GAGGCGGAGG TTATTGAAAA AGCCGGAGTA AAGCTTGTGG TGGGGAAGGG GGGCATGGGC
AAGAGGACTG CGGAAGCCAT GAAGAAATAC ACGGCGGCGT ATGCCATTTT CACCGGGGGG
GCTGGGGTAC TGGCGGCGAG GGCGATAAAG AGAGTCATAG ATGTTCACTG GCTTGACTTG
GGCGTCGCAG AGGCCATGTG GGTGCTGGAG GTGGAGGATT TCGGGCCCCT GACCGTGATG
ATTGACTCCA CTGGGAGGAA CTTCTACGAC GAGTTGCGGG AGGACGCCAA GAGGCGTATC
CCAGAGATAC TTAAGGAGAT TGAGTGGGGC CATTAG
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| Protein sequence | MLLIPCVVCA MAVYRLKTPL SDSDVSRLRV GDTVYISGVV VSARDSAHKR MVELLQKGEP
LPVDLRGGVI YHAGPVAQRV DGGWRIISMG PTTSARMEAF EAEVIEKAGV KLVVGKGGMG
KRTAEAMKKY TAAYAIFTGG AGVLAARAIK RVIDVHWLDL GVAEAMWVLE VEDFGPLTVM
IDSTGRNFYD ELREDAKRRI PEILKEIEWG H
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