| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcal_1057 |
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| Symbol | |
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| ID | 4909556 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pyrobaculum calidifontis JCM 11548 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009073 |
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| Strand | + |
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| Start bp | 996533 |
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| End bp | 996967 |
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| Gene Length | 435 bp |
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| Protein Length | 144 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640124809 |
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| Product | like-Sm ribonucleoprotein, core |
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| Protein accession | YP_001055948 |
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| Protein GI | 126459670 |
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| COG category | [K] Transcription |
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| COG ID | [COG1958] Small nuclear ribonucleoprotein (snRNP) homolog |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.0835577 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCCACAA CTCTTGCAGA GGCAAACAAG AGATTCGTGG CAGAGTTAAA CAGCCTAATT
GGAAGAGAGG TGCAGGTGGT TTTATCAAAC GGCGAAGTGT ACAAGGGCGT TCTACACGCC
GTGGACAGCC AGCTCAACAT ACTCCTGGCA AACGCCACGG CGAAGTCCGG GGATAGGTAC
AACCGGGTCT TCATAATGTA TAGATACATT GTACACATAG ACAGCGTTGA GAAGAGAATA
GACCTAAGAG AATTCGCAAA ATACGCCGAA AAGGTGTTCC CAGGCATGGT GAAGTACGTA
GAAGAGACAA ACACAGTCCT AATAGGGGAT AAGGTACGCG TAAGCGAAAT TGGAGTCGAG
GGAGTAGGCC CAGTGGCAGA GAGAGCAAAA AGACTCTTCG ACGAATTTCT AAAGATGCGG
GGAGAGGGGG CCTAA
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| Protein sequence | MATTLAEANK RFVAELNSLI GREVQVVLSN GEVYKGVLHA VDSQLNILLA NATAKSGDRY
NRVFIMYRYI VHIDSVEKRI DLREFAKYAE KVFPGMVKYV EETNTVLIGD KVRVSEIGVE
GVGPVAERAK RLFDEFLKMR GEGA
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