| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcal_1052 |
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| Symbol | |
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| ID | 4909321 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pyrobaculum calidifontis JCM 11548 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009073 |
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| Strand | + |
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| Start bp | 992418 |
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| End bp | 994067 |
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| Gene Length | 1650 bp |
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| Protein Length | 549 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 640124804 |
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| Product | thermosome subunit |
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| Protein accession | YP_001055943 |
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| Protein GI | 126459665 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0459] Chaperonin GroEL (HSP60 family) |
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| TIGRFAM ID | [TIGR02339] thermosome, various subunits, archaeal |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.0241449 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCCAGG CAGTGTTGAC TCAGATAGGT GGAGTTCCAG TGCTGGTGCT CAAGGAGGGC
ACACAACGGG CGTTTGGGAA AGAGGCGCTT AGGCTCAATA TAATGATTGC GAGGGCAATT
GCCGAGGTCA TGAGGACGAC GCTTGGGCCA AAGGGGATGG ACAAGATGCT CATAGACTCG
CTTGGCGATA TAACTATCAC AAACGACGGC GCCACGATCC TAGACGAGAT GGATGTACAA
CACCCCATCG CCAAGCTCCT TGTTGAGATT TCTAAGTCGC AGGAGGAGGA GGCGGGAGAC
GGCACTACGA CCGCGGTGGT GCTCGCCGGC GCGCTTCTTG AGGAGGCTGA GAAGCTTCTA
GAGAAGAACA TCCACCCGAC GGTAATTGTA AGCGGCTTCA AGAAGGCGCT TGACGTAGCC
ACTGAGCATT TGAGAAAAGT GGCCGTGCCG GTGAATAGGA GCGACGTAGA TACGCTTAAG
AAGATCGCCA TGACTTCCAT GGGCGGCAAG ATAAGCGAGA CTGTGAAGGA GTATTTCGCT
GACTTGGCCG TGAGGGCCGT ACTGCAAGTT GCCGAGGAGA GGAATGGGAA GTGGTACGTG
GACTTGGACA ACATCCAAAT TGTGAAAAAG CACGGGGCCT CCCTCCTTGA CACACAGCTA
GTGTACGGCA TTGTGATAGA CAAGGAGGTT GTACACGCCG CTATGCCGAA GCGCGTGGTA
AACGCCAAGA TAGCCCTCTT AGATGCGCCT CTTGAGGTGG AGAAGCCCGA GATAGATGCG
GAGATCAGAA TCAACGATCC GACGCAGATG AGGGCCTTCT TGGAGGAGGA GGAGAAGATA
CTGAAGGGCT ATGTCGACAA GCTGAAGTCC CTCGGCGTAA CTGCCCTGTT TACCACCAAG
GGAATTGACG ACATAGCGCA GTACTACTTG GCCAAGGCCG GGATCTTGGC CGTGAGGAGA
GTGAAGCGTA GCGACATTGA GAAACTGGTG AGGGCCACCG GCGCCCGCCT TGTCACAAGC
CTCGAAGACC TCACAGAGGC AGACCTAGGC TTCGCCGGCT TGGTGGAAGA GCGCCGCGTG
GGAGATGAGA AGATGGTGTT CGTGGAGCAG TGTAAGAACC CGCGCGCGGT GTCCATATTG
GTGCGCGGCG GCTTTGAGAG GCTCGTGGAC GAGGCTGAGA GAAATCTCGA CGACGCCCTA
TCTGTAGTTG CCGACGTCGT AGAAGAGCCG TACATACTGC CGGCAGGAGG CGCAGCGGAG
ATCGAGGCCG CCAAGGCTGT TAGAGCGTTT GCCCCCAAGG TAGGCGGCAG AGAGCAGTAC
GCAGTTGAGG CCTTCGCAAG AGCCCTAGAG GCAATACCCA AGGCACTTGC AGAAAACGCC
GGCCTCGACC CCATCGACAT ATTGACAGAG CTGACTCACA AGCACGAGCA GCCAGACGGA
TGGAGATACG GCCTAGACGT CTACCAAGGC AAAGTCGTGG ACATGATGAG CCTTGGCCTA
ATCGAGCCGC TTACGGTAAA GATAAACGCG CTTAAAGTGG CCGTCGAGGC CGCCAGCATG
ATCCTGAGAA TAGACGAGAT AATCGCGGCC TCTAAGCTGG AGAAAGAAGA GAAAGAAAAG
AAGGAGGAGA AGAAGGAGGA ATTCGACTAA
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| Protein sequence | MSQAVLTQIG GVPVLVLKEG TQRAFGKEAL RLNIMIARAI AEVMRTTLGP KGMDKMLIDS
LGDITITNDG ATILDEMDVQ HPIAKLLVEI SKSQEEEAGD GTTTAVVLAG ALLEEAEKLL
EKNIHPTVIV SGFKKALDVA TEHLRKVAVP VNRSDVDTLK KIAMTSMGGK ISETVKEYFA
DLAVRAVLQV AEERNGKWYV DLDNIQIVKK HGASLLDTQL VYGIVIDKEV VHAAMPKRVV
NAKIALLDAP LEVEKPEIDA EIRINDPTQM RAFLEEEEKI LKGYVDKLKS LGVTALFTTK
GIDDIAQYYL AKAGILAVRR VKRSDIEKLV RATGARLVTS LEDLTEADLG FAGLVEERRV
GDEKMVFVEQ CKNPRAVSIL VRGGFERLVD EAERNLDDAL SVVADVVEEP YILPAGGAAE
IEAAKAVRAF APKVGGREQY AVEAFARALE AIPKALAENA GLDPIDILTE LTHKHEQPDG
WRYGLDVYQG KVVDMMSLGL IEPLTVKINA LKVAVEAASM ILRIDEIIAA SKLEKEEKEK
KEEKKEEFD
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