| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcal_1045 |
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| Symbol | |
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| ID | 4909140 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pyrobaculum calidifontis JCM 11548 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009073 |
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| Strand | + |
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| Start bp | 983788 |
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| End bp | 985179 |
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| Gene Length | 1392 bp |
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| Protein Length | 463 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 640124797 |
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| Product | ABC transporter related |
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| Protein accession | YP_001055936 |
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| Protein GI | 126459658 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3845] ABC-type uncharacterized transport systems, ATPase components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.00215418 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCCATTCC TCCGCGCGGT CGGAATTAGG AAGTTTTTTC CAGGCGTTGT CGCTCTCGAC
GGAGTAGACT TTGAGGTGGA GAGAGGCGAG GTCCACGCCC TCCTGGGGGA GAACGGGGCT
GGGAAATCTA CCCTGGTTTC AATTATCTAC GGGGTGTATC TCCCAGACGG CGGCGAGATC
TACATAGAGG GGAAGAGGGT TGAAATTACG TCGCCACGCC GCGCGGCGCA GATGGGGATC
TCGCTTATAT CGCAGCACTT CGCCCTAGTG GAGACGCTGA CGGTCGAGGA GAACTTAAAA
CTGGCCGGCG TGGAGGTAAA ACGCGCTCTA GAGATGGCGG ACATGCTTGG GGTAGAGCTA
CCTCTGGACA AGTACGTCGC CGAGCTCACC GTGGGCGAGA GGCAGAGGGT GGAGATAGTG
AAGGCGCTTG CGAAGGAGAG CGTGCTCTTC CTAATGGACG AGCCCACGGC CCTCCTCTCT
CCAAGGGAGT CGAAGGCTCT CCTCTCCACG GCTAAGAGAC TGGCTGAGCT GGGGAAGGCG
GTGGTGTTGG TGACACATAA GATTAGGGAG GCGGTGGAGG TGGCTGATAG GATAACTGTG
CTTAGGAGGG GGGTCAGAGT TGGCGTGTTT AAAAAGCCGT TTGACGAGGG CGAGTTGTTG
GAGGCTATGT TTGGCAAAGT GATTCAGAGG AGCGTCTACA AGTCGGCGGC AGGCGGCGAG
GTGATATACC GCGCCGAGGG GCTAACGGGC GAGAGAGTTC GCGACATGTC TATTGAGCTG
AGGCGCGGCG AGCTTGTCGC AGTTTTGGGA GTTGCAGGGA ATGGGCAAGA GGAGCTTATG
GAGCTCCTCG CGGGCTTCAA GAGGCCGCAG AGGGGCAGAA TTGTGCTAGA CGGCGTAGAT
ATGACGGGCC GGCCCTTCGC AGAGTTTTTA AGACGCGGCG TCGTCTATTT GCCAGAGGAT
AGAGGCCGCG CCTTAGCGAG AGATTTAAGC GTAATCGACA ACTTTAAGAT GCGTTGTTTC
AAGGACTGCG TGAAAAAACT TGAAGAGTTT AGGGAGCTAC TTGACATAGA CATACCGAGC
TTGTCCACAA GGGTAAGCGC GTTGTCGGGC GGAAATCAGC AGAAGCTCCT CCTGGCCAGA
GAGCTGCTCC TCCGCGACCC CTACATAGTC GTGGCCTCTT ACCCCACCCG CGGCCTCGAC
TTAGAAACCA GCGAGAAGTT CTATGCCATT GTTAGAAAGG TGGTCAAGGG CGCGGCTGTG
GTGAGTTTGG AAGACGTGGA GGAGGCCGTG GAAAAGGCCG ATAGGATATA CGTGCTCTCC
AGAGGCCGCG TTGTTGCCTC ATTCACGCCG CCCTACGACG TCGATCAGAT CGCAGAGGCC
ATGGCCTCAT GA
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| Protein sequence | MPFLRAVGIR KFFPGVVALD GVDFEVERGE VHALLGENGA GKSTLVSIIY GVYLPDGGEI
YIEGKRVEIT SPRRAAQMGI SLISQHFALV ETLTVEENLK LAGVEVKRAL EMADMLGVEL
PLDKYVAELT VGERQRVEIV KALAKESVLF LMDEPTALLS PRESKALLST AKRLAELGKA
VVLVTHKIRE AVEVADRITV LRRGVRVGVF KKPFDEGELL EAMFGKVIQR SVYKSAAGGE
VIYRAEGLTG ERVRDMSIEL RRGELVAVLG VAGNGQEELM ELLAGFKRPQ RGRIVLDGVD
MTGRPFAEFL RRGVVYLPED RGRALARDLS VIDNFKMRCF KDCVKKLEEF RELLDIDIPS
LSTRVSALSG GNQQKLLLAR ELLLRDPYIV VASYPTRGLD LETSEKFYAI VRKVVKGAAV
VSLEDVEEAV EKADRIYVLS RGRVVASFTP PYDVDQIAEA MAS
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