| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcal_1044 |
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| Symbol | |
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| ID | 4909183 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pyrobaculum calidifontis JCM 11548 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009073 |
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| Strand | + |
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| Start bp | 982502 |
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| End bp | 983788 |
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| Gene Length | 1287 bp |
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| Protein Length | 428 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 640124796 |
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| Product | basic membrane lipoprotein |
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| Protein accession | YP_001055935 |
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| Protein GI | 126459657 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1744] Uncharacterized ABC-type transport system, periplasmic component/surface lipoprotein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.00211594 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTCGGCAA GTAGGAGGGA GTGGCTTAAG GCCGTCGCCT CCTTTGCCGT AGGCGCAATT
GTGGGTAGCG GCGCCACGTA CGCCGCCTTG CAGAGTATAG GGCGAGCAGT GGAGAAGGTG
GCCACCACCT CGCCCACAGC CACGGTTGCG CCCTCGCAAG CGGGCTTGCC CAAGATGAAG
GCCTACTTCA TCTACGTGGG GCCAGTCGGC GACTACGGCT GGACGTATGC CCACGACAGA
GGGCGGCGGT TTGCCGAACG TGCCCTCTGC CCCAGCGAGA GGTGGTGTAT TGTGGAGACG
AAGTACGTGG AGAGCGTGCC CGAGGACCAG GCCTACACTT ACGTGAAGAG GGCTGTCCAA
GAGGGGGCTC ACATAGTGTT TACAACGTCG TATGGCTTTA TGGATGGCAC AAAGCAGGCG
GCGAAGGAGT TCTCAGATAG GTTCTTTGCC CACTGCTCCG GCTATTTTGC GAGCCCGGAG
GAGTGGGCCC AGTTGAAGAA CTTCGCCGAG TATTTCATTG ACCTCTACGA GGCTTATTAC
CTCAACGGCA TTGTGGCTGG GAAAATGACT AAGACTAACA AGCTTGGGTA TGTCGCAGCG
TTTCCAAAGT TGCCCGAGAT TATACGCCAC ATGAACGCCT TCCTAATAGG CGCGCGGGAG
GTGAATCCCA ACGTGAAAAT GGACGTGGTA GAGCTCGGCG CGTGGTACGC CCCAGACAGG
GCCAGGTCCG CCGCAGTGAA TTTAGTAGAG GCCGGTGTCG ACGTCCTCGC CTTCACTGAG
GATAGCCCCA CCGTGTTGCA GGTGGCAGAT GAGTATCAGC AGAGGGGCAA GGCCGTGTGG
TCCTTCTCCC ACTACTCGGA TATGAGCAAG TATGGGCCGA GGGCCCACTT GACTGGGCAA
GTGGTGAACT GGGGGCCGTT GTACGTGGAG ATGTTGATTA GGGCCTACTT GGCGTGGGTC
TCTGGCGATA TTACGTTGTG GAGCGAGTGG CCGCCAGAGA GGCCCCGGGA CTACTGGTGG
AGCATGAAAA ACGCCTACGC GGGATATGGA CATGACAAGA ATCCCGCCGA CATAATTTTG
CCGCTTAACT CAGCTGTGCC AGAGGAGGTG AGGAGGTACG TAGATCAGAG GAGGAGGGAG
ATCATTGAGG GCGTGTGGGA CCCATTCACT GGGCCAATTA GGGATAGAGA GGGGAGGTTG
AGGGTGCCGG AGAGAAGGCG CCTTAGCAAG GACGAGTTGT ACAACATGGA CTGGTACGTG
GAGGGCTACG GGAAGCTTCC GGCGTAA
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| Protein sequence | MSASRREWLK AVASFAVGAI VGSGATYAAL QSIGRAVEKV ATTSPTATVA PSQAGLPKMK
AYFIYVGPVG DYGWTYAHDR GRRFAERALC PSERWCIVET KYVESVPEDQ AYTYVKRAVQ
EGAHIVFTTS YGFMDGTKQA AKEFSDRFFA HCSGYFASPE EWAQLKNFAE YFIDLYEAYY
LNGIVAGKMT KTNKLGYVAA FPKLPEIIRH MNAFLIGARE VNPNVKMDVV ELGAWYAPDR
ARSAAVNLVE AGVDVLAFTE DSPTVLQVAD EYQQRGKAVW SFSHYSDMSK YGPRAHLTGQ
VVNWGPLYVE MLIRAYLAWV SGDITLWSEW PPERPRDYWW SMKNAYAGYG HDKNPADIIL
PLNSAVPEEV RRYVDQRRRE IIEGVWDPFT GPIRDREGRL RVPERRRLSK DELYNMDWYV
EGYGKLPA
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