| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcal_1040 |
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| Symbol | |
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| ID | 4908822 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pyrobaculum calidifontis JCM 11548 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009073 |
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| Strand | + |
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| Start bp | 976386 |
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| End bp | 978212 |
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| Gene Length | 1827 bp |
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| Protein Length | 608 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640124792 |
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| Product | aldehyde ferredoxin oxidoreductase |
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| Protein accession | YP_001055931 |
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| Protein GI | 126459653 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG2414] Aldehyde:ferredoxin oxidoreductase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.000164152 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGCTGGGT GGCAGGGAAG AGTTCTTCGG GTGGACTTAA CAAGAAAGAA GGTCGTGGTG
CAAGAGCTAG ACGCCTCTGT GGCGCGTCAG TTTATTGGGG GCAGGGGGCT CGCCGTGAAG
ATCTTGTGGG ACGAGCTTCC CCCCGGCGTA GACCCCCTCT CTCCATACAA CAAACTGGTT
TTCGCGGCAG GCCCCCTCAC CGGCCTCCCT GGTCCCAACT TTGGGAAACT AGTAGTAGCG
GCTAAGAGCC CCCTCACCGA GGGCTACGGC GACGGCAACA TTGGGACGTG GGTCGCCGTC
AATTTGCGCA AAGCGGGGTA CGACGCACTC GTCGTAGAGG GGAAGGCCGA GAAGCCCTCC
TATATCTACA TAGAGGGCGA TAAGGTGGAG ATCTACGATG CGCGGGACCT CTGGGGGCTA
AACGCGTGGG CTACTGAGGA GAAGCTCCAG AAGATACACG GGCGAGATGC CGCAGTTGTG
ACAATAGGCC CCGCCGGCGA GAACTTAGTG CGGTTTGCCA CAGTGGTGTC TCAAAAGGGC
CGCTCTGGGG GGAGGCCGGG GATGGGGGCG GTCATGGGGT CTAAGCTGTT GAAGGCGGTG
GTGGTCAAGG GCAAGGGCGA AATTCCCATA GCTGACAAAT CTGCCTACCA GAAGCTTGCC
GTGGAGGCGG TTAAGGAGGG CTCCTCTAGC CCAAGCTACG GCTTCTGGAT GCGGCAGGGC
ACAACTTCGA CGGTGGAGTG GGCGCAGGAG GCCAGCGTGC TTCCCACGTA CAACTTCTCG
GAGGGGCAGT TCGAGGAGTT TGAGAAAATT GGGGGCGCCG CCGTGGAGAA GTTTGAGACA
GACCTCAAGT CGTGTCCCCT GTGCTTCATG GCGTGCGGCC ACTGGGTCCC CGCGGTGGAG
GGCACGGCGG AGGTGGACTA CGAGAACATA GCCATGTTGG GATCCAACCT GGGGATAGGC
GACTTGCAGA AGGTAGCCGA GTTGAACAAA ATCGCCGACG TAATGGGCAT GGACACCATA
TCGCTCGGCA ACGTGCTCGG CTACGCCATG GAGGCGTCCG AGAGGGGGCT TGGGGACAAG
CTCGGCTTTG TGGTAGAGTG GGGCGACTTC GAGGCGGCTA GGCAACTGGC CCTAGATATT
GCGCATAGGA GGGGATTCGG CGACCTCTTG GCCGAGGGAG TCAAGAGAGT GGCGGAGAGG
ATCGGGGGCA CCGACTTTGC GATACACGTC AAGGGGCTCG AGGTCTCTGC CTACGACTGC
CACGCCGCGC CAGCCATGGC GCTTGCGTAT GCCACATCGC CGATTGGGGC CCACCACAAG
GATGCCTGGG TAATATCCTG GGAGGTTAAG ACAGACCGCT TCGGCTACAC GAGGGAGAAG
GCCGCCAAAG TGGTGGAGTT GCAGAGGATT AGGGGCGGGT GGTTTGAAAC CTTTGTGGGC
TGCCGCTTCC CCTGGGTCGA GGTGGGCCTG CCGCTTGAGT GGTACGCCAA GTTGTTCAAG
GCCGCCACGG GGGTAGACGC AACCCCCGAC TACTTCAACG AGGTGGGAGA CAGGATATAC
GCCCTGATAA GGGCCTTCTG GATAAGAGAG TACGGGCAGT GGAGCAGGGA CATGGACATG
CCGCCGGCTA AGTGGTTTAA ACAGCCGCTG ACGCGCGGCC CACTGAAGGG GGCGCGGCTC
GACTACGACG GTTACAACCA GCTCCTGGAC TACTACTACG AGATCAGGGG GTGGGACAGG
CGCGGCGTGC CGACGCGCGA GACGCTGAGA AAGCTCGGCC TAGACTACGT AATCCCCACC
CTCGAGAAAG TGGTAGAGCT GGCCTAG
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| Protein sequence | MAGWQGRVLR VDLTRKKVVV QELDASVARQ FIGGRGLAVK ILWDELPPGV DPLSPYNKLV
FAAGPLTGLP GPNFGKLVVA AKSPLTEGYG DGNIGTWVAV NLRKAGYDAL VVEGKAEKPS
YIYIEGDKVE IYDARDLWGL NAWATEEKLQ KIHGRDAAVV TIGPAGENLV RFATVVSQKG
RSGGRPGMGA VMGSKLLKAV VVKGKGEIPI ADKSAYQKLA VEAVKEGSSS PSYGFWMRQG
TTSTVEWAQE ASVLPTYNFS EGQFEEFEKI GGAAVEKFET DLKSCPLCFM ACGHWVPAVE
GTAEVDYENI AMLGSNLGIG DLQKVAELNK IADVMGMDTI SLGNVLGYAM EASERGLGDK
LGFVVEWGDF EAARQLALDI AHRRGFGDLL AEGVKRVAER IGGTDFAIHV KGLEVSAYDC
HAAPAMALAY ATSPIGAHHK DAWVISWEVK TDRFGYTREK AAKVVELQRI RGGWFETFVG
CRFPWVEVGL PLEWYAKLFK AATGVDATPD YFNEVGDRIY ALIRAFWIRE YGQWSRDMDM
PPAKWFKQPL TRGPLKGARL DYDGYNQLLD YYYEIRGWDR RGVPTRETLR KLGLDYVIPT
LEKVVELA
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