| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcal_1038 |
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| Symbol | |
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| ID | 4908447 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pyrobaculum calidifontis JCM 11548 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009073 |
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| Strand | - |
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| Start bp | 973486 |
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| End bp | 974940 |
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| Gene Length | 1455 bp |
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| Protein Length | 484 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640124790 |
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| Product | starch synthase |
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| Protein accession | YP_001055929 |
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| Protein GI | 126459651 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0297] Glycogen synthase |
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| TIGRFAM ID | [TIGR02095] glycogen/starch synthases, ADP-glucose type |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.0000142829 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTACGCTC CTGAGAAAAT TCGCCGGGTG TACATACTCA CGTTTGAATT TGCTGGCCTC
GTGAAGGTGG GGGGTCTTGC CGAGGCCGTA CGCCAGTACG CTGTGGGGCT GGCCAAGAGG
GGGTACGACG TAACGGTGCT CATGCCCAGC CACGGGAGGC ACCTCGACCC CAACAGAGGT
TTTGACCTAT TCCCCCTCGA CTTCCGCGCG TGTGGAGAGA GGTGGGGCGT GGACGGCAAG
GCATATCCGT ACTGCCTGGG GGCAGAGATC ACGTGGGTGC AGGGCGTTAA GATCGTCATG
TTTAAGGGTC TCGACTACGC CACAGGCCAC GTCTTTGACA GATGGGGCGT CTACGAGTAC
GCCGAGGAGA AGTCTGCCCT TCTCGCGAGG GCGGCTGTGG CCTTCGCCGA GAGGTTCGGC
CTCCCTGACT TAGTGCACGT GAACGACTGG CCCACCGTCT TGGCTGGCGT CGCTTTAAAG
GACTTAGGCG AGAGGAGGGG GGTCGCCCTG CCTCTGCTCT ACACCATCCA CTTGTCGTGG
GACTACGCCT TTCCTTGGCA CTACGCGGAG TGGGCCGGAC TTGTGAATAG GCCACACCCG
GTGTGGCGAG TCTGTTGCCA CCGCTATGAG TACTACGACG CCGTGTGGAA CGAGGCGTGG
GGAAACGTGG AGAAGTTCGG GGTGCTGGAG GCCGACGTAA TCTCCACAGT GAGCTACGGC
TACCTCGAGG AGCTGTTGAA TAAACATGGG CAGTGGCTGA GGGATAAGTC TTGTGTTGTG
TATAACTCCA CCGATTGGTC TATAGACGAG GTGGCTGGCG TTTCAGAGGG CGACGTGTGG
AAGCTTGTGA AAGAGGCCGA GGGGCTGGGC GCCGTGGGAC ACGTAGAGCC TGGAGGGGCG
CTTTTTCTTG CGGTTGGCAG ACTCTCGTGG CAGAAGGGCA TAGACTTGGC CGTCAAGGCG
CTTGACTTCA GCTCCTCGGC CCGCCTGCTC ATCTTGGGGA TGCCCGCGGG AGAGCCCGGC
TACGAGGAGT ACGTGAAGCG TCTTGTGGCC GAGCGGTGGG GTAAGGCGGC GTTGGTGACC
TCTAGGGTCC CCCCCAGACT GTACAAGGCG CTTCACTATG TGGCAAAGGC CTTGGTAATG
CCCTCGCGGT GGGAGCCCTT CGGCATATCG GCGATAGAGG CCATGGCCCT CGGAACCCCC
GTGGTGGCCG CCAGAGTCGG CGGCTTGCCT GAAGTAGTAG ACGGCTACGG CGTCTTAGTG
GAGCCAGAAG ATGTAGAGGG ACTTGGCAGG GTGCTTGAGG CGCTGGCCAC AGGCGTCTAC
AAGACCCCTC CGCGTCACGA GATCGTTAAG TACGTGGATA GCAGATTTCG GCTTGTACAT
ACTGTCGATA TGTTGGAGAA GTGCTACGAG AGGGCCAGGA CCTTTGCCTA CTACAGGGCT
GTGACTGTGA GATAG
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| Protein sequence | MYAPEKIRRV YILTFEFAGL VKVGGLAEAV RQYAVGLAKR GYDVTVLMPS HGRHLDPNRG
FDLFPLDFRA CGERWGVDGK AYPYCLGAEI TWVQGVKIVM FKGLDYATGH VFDRWGVYEY
AEEKSALLAR AAVAFAERFG LPDLVHVNDW PTVLAGVALK DLGERRGVAL PLLYTIHLSW
DYAFPWHYAE WAGLVNRPHP VWRVCCHRYE YYDAVWNEAW GNVEKFGVLE ADVISTVSYG
YLEELLNKHG QWLRDKSCVV YNSTDWSIDE VAGVSEGDVW KLVKEAEGLG AVGHVEPGGA
LFLAVGRLSW QKGIDLAVKA LDFSSSARLL ILGMPAGEPG YEEYVKRLVA ERWGKAALVT
SRVPPRLYKA LHYVAKALVM PSRWEPFGIS AIEAMALGTP VVAARVGGLP EVVDGYGVLV
EPEDVEGLGR VLEALATGVY KTPPRHEIVK YVDSRFRLVH TVDMLEKCYE RARTFAYYRA
VTVR
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