| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcal_1036 |
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| Symbol | |
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| ID | 4908812 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pyrobaculum calidifontis JCM 11548 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009073 |
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| Strand | + |
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| Start bp | 971426 |
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| End bp | 972247 |
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| Gene Length | 822 bp |
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| Protein Length | 273 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 640124788 |
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| Product | hypothetical protein |
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| Protein accession | YP_001055927 |
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| Protein GI | 126459649 |
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| COG category | [S] Function unknown |
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| COG ID | [COG2106] Uncharacterized conserved protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.0000026876 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | GTGTTTTCTA TTGCAATTCC ACACGATTTT CTTTCTGAGT CTCCAGATGA GGCTAGCAAG
GTGAGGAAGA TTGGCTTCTT GGCTAGGGCG GCGGCGATTT TCAAGGCCCC CCTAATCATA
ATCTACCACT ACGGGAAGCC GCTTAGAGAA GAAATAGACC TCATGAAGAC GTTGTTAGAG
TACTTGGCCA CGCCCCCCTA CCTTAGGAAA AAGGTGTATA AGCTAGACAA GAGGCTTAAG
CTAGCTGGAC TCCTTCCCCC ACTTAAGATT CCCAGCCACG TTGCGCCAGA AGAGCCCCGA
GTCGGCGAAG TGCGCGAGGG GGTGGTGGAG CGGTGGGACG GCTACTACTC CCTCGTCTAC
ATCGGCGGGG GCAGATACGC CAAGGTGCCA AAGCCGTATC CAATAGGGAC ACGCCTCCTC
GTGAAAATAG AGGCGCCCAC CCAGAGGTCT GACACGTTCA GAGCCTCGGT GTTCAAGGGG
CCTCCGCCCG CGTATTGGGG CTACCGCGTC GAGGTAAGAC CCCTGGAGAC TCTGACAGAG
GGTTTCGACA CTGTGGTACT CACGGGCAAG GAGGGAAAGT CTATATGCGA AACGAACATT
AGACTGGGAG AAAAGACGCT TATAGTTTTT GGCAGTCCGC GCAAGGGCGT TGACGAAATA
TACAGAGAGG CGGGGCTGAA GCCCCCCGGC GATCTGGTGA ACTTTGTGCC TGGGCAGGGA
GTTGAGACTA TTAGGACAGA AGAAGCCGCC TTTATTGTCT TAGGCGTGTT GCACTACTTA
GCCAATTGCG GCGCTAGACG AGGTTGTAGT CCTCGAGCTT GA
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| Protein sequence | MFSIAIPHDF LSESPDEASK VRKIGFLARA AAIFKAPLII IYHYGKPLRE EIDLMKTLLE
YLATPPYLRK KVYKLDKRLK LAGLLPPLKI PSHVAPEEPR VGEVREGVVE RWDGYYSLVY
IGGGRYAKVP KPYPIGTRLL VKIEAPTQRS DTFRASVFKG PPPAYWGYRV EVRPLETLTE
GFDTVVLTGK EGKSICETNI RLGEKTLIVF GSPRKGVDEI YREAGLKPPG DLVNFVPGQG
VETIRTEEAA FIVLGVLHYL ANCGARRGCS PRA
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