Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pcal_1017 |
Symbol | |
ID | 4908799 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pyrobaculum calidifontis JCM 11548 |
Kingdom | Archaea |
Replicon accession | NC_009073 |
Strand | - |
Start bp | 957387 |
End bp | 957623 |
Gene Length | 237 bp |
Protein Length | 78 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 640124769 |
Product | ferredoxin |
Protein accession | YP_001055908 |
Protein GI | 126459630 |
COG category | [C] Energy production and conversion |
COG ID | [COG1141] Ferredoxin |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.194367 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGGCCTTG TGCCTGTGCG AGTCAAGATT GATAGAGAGA GGTGTGTAGT TGCCCACTTC TGTTTCTTCT ATGCGGCGAC AGTGTTTATC CCAGGGGAGG GGGGAAAGCC GGTTATTTCG CCCGAGTACG CCGTCAACGG CGTCTCAGAG GGCGTGGTGC CAGACGAGTT GTACGAGCAA GTTAAAGAGG CTGAGAGGCA CTGCCCCTCT AGGGCAATTA AGGTGTACCG GGAGTAG
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Protein sequence | MGLVPVRVKI DRERCVVAHF CFFYAATVFI PGEGGKPVIS PEYAVNGVSE GVVPDELYEQ VKEAERHCPS RAIKVYRE
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