| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcal_1005 |
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| Symbol | |
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| ID | 4908980 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pyrobaculum calidifontis JCM 11548 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009073 |
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| Strand | - |
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| Start bp | 947094 |
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| End bp | 949460 |
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| Gene Length | 2367 bp |
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| Protein Length | 788 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640124755 |
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| Product | hypothetical protein |
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| Protein accession | YP_001055896 |
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| Protein GI | 126459618 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1361] S-layer domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTTCGA TATATCGGGT CCTTCCGCTC GTGGCGCTGG CGGCCCTCGT GTTTGCGCAG
TCGGCGCCTC AAGCCCCTAT TAGCGTGTCC GTGTCGTACT CCCCGCCCTA TGTCTACCCC
GGCTCTGTGC TCCAGCTGTA CATCACAGTG TTTTCGCCGC AGAGCCTCAC CTATGTCTAC
GTCGACGTGG ATTCCCCCTT CAAGGTCCTC ACGGGGACGA CGATGCAGAT CCCCAAGTTG
GCGGCTAACA CGCCCACCAC TCTCACGGCG GTTGTGCAAG TCCCCCTAGA CGCCAAGCCG
GGAAGCTACA GGGTGAAGGT CACGGCGTAT ACTCTGTTCA CGTCCGCCGA GGCCTCCGTG
GACTTTGAAG TGCTACCTTT CGACTTCTCC TCGCTAATCG TGGCGGTTCC CAGTAGCTAT
GTGGCTGGGC AACCTGCGCA ACTCCCGGTG CTTGTGATAA ACCCCACCTT GGACTTCTTG
AAGGTGAACA TCAACGCGAC GGGGGGCGTG GTAGAGAACT ACCTAAACCG CTCAACCGCC
TGCGATGTCA CTGTGGCGCC GAGGGGAAAT GCCACGTGTT TTATAGTGTT TAAAGTGGCT
GGCGGTGCCA GGCCCGGCTT TTACGACGTT ACGCTGTCAG CACAGTTGAG GAGTCTGTCT
GGATACGCGG GCTCTGTAAG CGTTAAAAAA GTCGTTCAAC TCCCCGTGGT CAGCGCCCCC
GATGTAAATA TCGTAGCAAC CCCGGCCCAG CCGCCTGTGG CTGGCACGCC CACTGTGTTG
ACCCTATACG TGACGCCGGG GAGCGCTGGC GTTCTTCAGA ACGTGACGGT GAGAGTGGTC
GACGGGGAGG GAGTAAGAGT GCTTTCCGGG GGGTTCGCCG TGGCGCCCAT GCTCACGCAA
CTGCAATTGC CTGTACAAGT GGTGTTTTAC AGGTATGGCA ACGTCCCCCT GCCTGTGGAG
ATCTGCCTCT ACTCTGGCAC ATGTATTACG AGACTCGTCT CAGTGTACGT GCCAACTCCC
AAGATAGTAG TCAACGCAGT GTTCAACCCG CCGAGGGGGT ACCCTGACTC TATTGTGCAA
GCCACCTTTA TCGCCGCCTC TAACTACACT GCCTCCGACG TGATCGTAGA GGTGCATGCG
CCCTTTAAGC TCATCTCGCT TACTCCCACG CGGATCCCAT TCCTCACTCC GCAAAGCCCC
GCCACTATAA CTGCGGCGTT TGAAATACCG CCTTCCACAA GGCCGGGGCT TTACCCAGTC
GCTATAAGGG TGGGGAATGC CAACTACACC TTCTACTACG AGGTTAAGCC GCAGGAATTT
ACTGTGTCTA TGGCGTTCAA CCCGCCGATC TCCTACCCCG GCGGGCTAGT TACTGGGACG
GCGACGGTTG TCTCGCCGTT TACTGCGTCT AACTTGACCA TCCGAATTTC GACTCCGCTT
AAGCCCCTCT GCAACGCAGA GGTTAATGTG CCAGTGCTAC CTCAGGGCCA GCCGTTTACT
ATCCCATGCG TCTTTCAAAT CCCAGAGGAT GCACAGCCGG GAGAGTACCC GGTGTCCGTG
GCCGTGGGCG ACGCCAACTA CACCTTTTAC TTAACCGTTG GCGCGCCGTC TGTGGCTGTG
CAAAACGTCT TGGCAACGCC GCCGAGGGTT TTAAAGGGCA TGCCCGTTGT CCAAGTGGCC
GTGCAGTTGA TAAACACTGG GCCTGTGGCC GCCAGGGGCG TGGTTGTACA ACTGTTAAAC
GGCACGGTGG GGCCGCGGGA GTTTAGAATC GACTACCTGC CGCCGGGATC CCCCACCACG
CTCACCTTCC TCCTCGACGC CTCAAAGCTA CAGCCCGGCC TCTACAGCGC CGTTGTCGAC
GTCAAGTGGA ACGGCGGCGA GGCCCGCGGG AGCGGGAGCT TTGAGGTAGT GGAAAAGTCT
ACGTTTAAGG TTGAGTACGC GGTATTAAAC GCCCAACCGG GGTCCACGGC CACTCTCCTG
CTCAACTTAA CCAACGTGGG GCCCTACGAG GCTAAGAACG TGAGACTCCT CATGACGCCC
TCCCAAGTGT TTGAGCCCCA CGCCTCCAAC ATAGCTGACG TTGCCACCGC CACTTCGAGA
GTCATCGGCG ACTTGGAACC CGGCTCCTCT GCCTCCACAG CGTTTTTGCT CGACGTGTCT
GACAAAGCGG CGCCGGGGAG GTACTACATA ACCTTCGTAG TGACGTGGAA TCAGACCAAC
GCGTTTGGCC CCGCGGTTCA GTACATCACT GTGCCAGTGG AGGTCAGAGG CGGCCTCGAC
CTCTTCGTAG TAGTGCCAGC AGCCCTCACC GTCGTTTTAA TCCTAGTCGG AGTCGCCATG
GCTCTGAGGA GGAGGCGCCG TGGATAA
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| Protein sequence | MSSIYRVLPL VALAALVFAQ SAPQAPISVS VSYSPPYVYP GSVLQLYITV FSPQSLTYVY
VDVDSPFKVL TGTTMQIPKL AANTPTTLTA VVQVPLDAKP GSYRVKVTAY TLFTSAEASV
DFEVLPFDFS SLIVAVPSSY VAGQPAQLPV LVINPTLDFL KVNINATGGV VENYLNRSTA
CDVTVAPRGN ATCFIVFKVA GGARPGFYDV TLSAQLRSLS GYAGSVSVKK VVQLPVVSAP
DVNIVATPAQ PPVAGTPTVL TLYVTPGSAG VLQNVTVRVV DGEGVRVLSG GFAVAPMLTQ
LQLPVQVVFY RYGNVPLPVE ICLYSGTCIT RLVSVYVPTP KIVVNAVFNP PRGYPDSIVQ
ATFIAASNYT ASDVIVEVHA PFKLISLTPT RIPFLTPQSP ATITAAFEIP PSTRPGLYPV
AIRVGNANYT FYYEVKPQEF TVSMAFNPPI SYPGGLVTGT ATVVSPFTAS NLTIRISTPL
KPLCNAEVNV PVLPQGQPFT IPCVFQIPED AQPGEYPVSV AVGDANYTFY LTVGAPSVAV
QNVLATPPRV LKGMPVVQVA VQLINTGPVA ARGVVVQLLN GTVGPREFRI DYLPPGSPTT
LTFLLDASKL QPGLYSAVVD VKWNGGEARG SGSFEVVEKS TFKVEYAVLN AQPGSTATLL
LNLTNVGPYE AKNVRLLMTP SQVFEPHASN IADVATATSR VIGDLEPGSS ASTAFLLDVS
DKAAPGRYYI TFVVTWNQTN AFGPAVQYIT VPVEVRGGLD LFVVVPAALT VVLILVGVAM
ALRRRRRG
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