| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcal_1000 |
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| Symbol | |
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| ID | 4908949 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pyrobaculum calidifontis JCM 11548 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009073 |
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| Strand | + |
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| Start bp | 941159 |
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| End bp | 942967 |
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| Gene Length | 1809 bp |
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| Protein Length | 602 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640124750 |
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| Product | glucosamine--fructose-6-phosphate aminotransferase |
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| Protein accession | YP_001055891 |
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| Protein GI | 126459613 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0449] Glucosamine 6-phosphate synthetase, contains amidotransferase and phosphosugar isomerase domains |
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| TIGRFAM ID | [TIGR01135] glucosamine--fructose-6-phosphate aminotransferase (isomerizing) |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTGCGGCA TCTTTGGCAT CGTCTTTGCT GAAAAGCCGC GGAGGCCTCT TGGGGAGATT
CTGAGGAGGG CTCTGGAGCG GCTTGAGTAC AGGGGCTACG ACTCTGCCGG CGTCGCCGTG
GTGGACAAGG GCCTTGTGGT TAGGAAAGAC GCTGGGAAAG TGGCCGAGGT AGCGTCTCGC
TACGGCTTCG ACGCCTTGCA GGGCACAGTC GGCATTGCGC ATACGCGTTG GGCAACCCAC
GGGAAGCCTG ACCAGAGCAA CGCCCACCCG CATACGGACT GCCGCGGCGT CATCGCAGTT
GTACACAACG GCATAATTGA AAACTATGCA GAACTGAAGA GGGAGCTTCT GGCGAAGGGC
CACGTGTTTA AGTCTGAGAC AGACACCGAG GTTGTGGTAC ATCTCGTGGA GGAGTACAAG
AGGCAGGGCC TTGACACTTT TACAGCGTTT AAGAAGGCGC TGGCGAGGAT TAGGGGGGCC
TACGCCATAG CGTTGATAGA CGCTGAGAAT CCCAATGCCA TATACTTCGC CAGGAATTTG
TCCCCTCTCA TAATAGGGGT CGGCGACGGC TTCAACATAG TTGCAAGCGA CATACCCACG
GTGCTGGACT ACACCAAGAG GATAGTCGCG GTGAGGGATG GGGAATACGG CTACATAACC
CCCACGGAGG TCTACATAGA GGCGGATGGA GTGCCCCAGC CCGTGTACGA GCGGGTGGAG
GAGATCCCCT GGAGCGCCGA GATGGCGACA AAGGGGGGCT ACCCCCACTT CATGCTCAAG
GAGATATATG AGCAGCCGGA GTCTCTCGCG AGCACTGTGG CAGGCCTTGA GTGGGCTCAG
CTCAGCGCCG TGGCCGACAT GCTTTTGTCA GCTAGAAACA TCTACGTCCT GGGGGCCGGC
TCCTCCTACC ACGCCGGCCT CACCTTTGCG GCGCGGCTCC CACGGCTGAG GCTCACCCCC
GTGCCCATAA TCGCCTCTGA GTATTACACA TATGAGCGGC TGTTTGACAG AGACGACGTG
GCGATAGCCA TATCTCAGTC TGGGGAGACC ATAGACACCA TCAGGGCCGC CAGGGCCATG
AGGGAGAGGG GGGTAAAGGT CGTCGCGGTG ACAAACGTCG TGGGGAGCAC TCTTGCCAGG
GAAAGCGACG TGGTAATATA TACGCGGGCT GGCCCCGAGA TAGGCGTCGC CGCCACTAAG
ACCTTCACTA CGCAAGTGGC CACCCTCTCA GCGCTTTACT TAGCGGTGCT GAAGGCGGTG
GGCGTAGATA CGTCGGAGCT GGAGAGGGAG CTCAAGGCGT TGCCCGAGGC GGTTAGAAAG
ACTATTGAAA ACACGGCCGG CACAGCCAAG GACTTGGCCA AGAGGATGAA GGAGAAGCGG
AGCGCATACT ACCTAGGCCG CGGGCTCTCT CTGCCCGTCG CCATGGAGGG AGCCCTAAAG
CTGAAGGAGG TGGCGTATAT ACACGCGGAG GCATATCCAG CGGGTGAGTC TAAACATGGG
CCAATCGCGT TGGTGGAGGA GGGGTTCCCC GTCGTCTTCG TGTTTTCAGA CCCCGACACT
AGGGAGAAGA CGCTTAGCAA TGTGGCAGAG ATGAAGGCGA GGGGCGCATA CGCCATCGGC
GTCGTGCCTG CAAAAAGCGA CTTGGCAAAG AAGCTTGACT TCCCCGTGGA GGTGCCCGAG
TCAGGGGAGC TCGCGGCCCC TGTGACCTAC GTAGTGCCTC TACAGCTCCT CGCCTACTTC
GCCGCCGTTG AGAGAGGGTA CGACCCAGAT AAGCCGAGGA ACTTGGCAAA AACTGTGACA
GTGGAGTAA
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| Protein sequence | MCGIFGIVFA EKPRRPLGEI LRRALERLEY RGYDSAGVAV VDKGLVVRKD AGKVAEVASR
YGFDALQGTV GIAHTRWATH GKPDQSNAHP HTDCRGVIAV VHNGIIENYA ELKRELLAKG
HVFKSETDTE VVVHLVEEYK RQGLDTFTAF KKALARIRGA YAIALIDAEN PNAIYFARNL
SPLIIGVGDG FNIVASDIPT VLDYTKRIVA VRDGEYGYIT PTEVYIEADG VPQPVYERVE
EIPWSAEMAT KGGYPHFMLK EIYEQPESLA STVAGLEWAQ LSAVADMLLS ARNIYVLGAG
SSYHAGLTFA ARLPRLRLTP VPIIASEYYT YERLFDRDDV AIAISQSGET IDTIRAARAM
RERGVKVVAV TNVVGSTLAR ESDVVIYTRA GPEIGVAATK TFTTQVATLS ALYLAVLKAV
GVDTSELERE LKALPEAVRK TIENTAGTAK DLAKRMKEKR SAYYLGRGLS LPVAMEGALK
LKEVAYIHAE AYPAGESKHG PIALVEEGFP VVFVFSDPDT REKTLSNVAE MKARGAYAIG
VVPAKSDLAK KLDFPVEVPE SGELAAPVTY VVPLQLLAYF AAVERGYDPD KPRNLAKTVT
VE
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